RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 IL25Q9H293 177 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 TBX21Q9UL17 535 aa13.5□□□□□ -0.25
SSH2-208ENST00000579040 ABCB11O95342 1321 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 LAMA3Q16787 3333 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 ITGB8P26012 769 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 CHMLP26374 656 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 CALML3P27482 149 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 RPS6P62753 249 aaKnown RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 BEX3Q00994 111 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 FPGSQ05932 587 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 CDC37Q16543 378 aaPredicted RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 DUSP28Q4G0W2 176 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 KIAA1211Q6ZU35 1233 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 PURBQ96QR8 312 aaKnown RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 UBA5Q9GZZ9 404 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 PDGFCQ9NRA1 345 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
SSH2-208ENST00000579040 DDX49Q9Y6V7 483 aaKnown RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
SSH2-208ENST00000579040 DYNC1LI2O43237 492 aaPredicted RBP13.48□□□□□ -0.25
SSH2-208ENST00000579040 TIMP1P01033 207 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 EDNRBP24530 442 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
SSH2-208ENST00000579040 PDE4DQ08499 809 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 TRDNQ13061 729 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 SEC23AQ15436 765 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 C9orf50Q5SZB4 431 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 IFIT1BQ5T764 474 aaKnown RBP13.48□□□□□ -0.25
SSH2-208ENST00000579040 Q7L0L9 218 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 FAM126BQ8IXS8 530 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 ADGRF4Q8IZF3 695 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 SCN10AQ9Y5Y9 1956 aa13.48□□□□□ -0.25
SSH2-208ENST00000579040 BAZ2BQ9UIF8 2168 aaKnown RBP13.48□□□□□ -0.25
SSH2-208ENST00000579040 NKRFO15226 690 aaKnown RBP eCLIP13.47□□□□□ -0.25
SSH2-208ENST00000579040 SGSM2O43147 1006 aa13.47□□□□□ -0.25
SSH2-208ENST00000579040 SMAD3P84022 425 aaKnown RBP13.47□□□□□ -0.25
SSH2-208ENST00000579040 USH1GQ495M9 461 aa13.47□□□□□ -0.25
SSH2-208ENST00000579040 CXCL17Q6UXB2 119 aa13.47□□□□□ -0.25
SSH2-208ENST00000579040 SCFD2Q8WU76 684 aa13.47□□□□□ -0.25
SSH2-208ENST00000579040 WDR11Q9BZH6 1224 aa13.47□□□□□ -0.25
SSH2-208ENST00000579040 CPVLQ9H3G5 476 aa13.47□□□□□ -0.25
SSH2-208ENST00000579040 STXBP5LQ9Y2K9 1186 aa13.47□□□□□ -0.25
SSH2-208ENST00000579040 DHX16O60231 1041 aaKnown RBP13.46□□□□□ -0.25
SSH2-208ENST00000579040 CD4P01730 458 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 CYP21A2P08686 494 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 CPT1AP50416 773 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 PTH1RQ03431 593 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 PPIGQ13427 754 aaKnown RBP eCLIP13.46□□□□□ -0.25
SSH2-208ENST00000579040 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 PPP2R5BQ15173 497 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 MFSD5Q6N075 450 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 CYB5R4Q7L1T6 521 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 FBXO11Q86XK2 927 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 MCF2L2Q86YR7 1114 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.25
SSH2-208ENST00000579040 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.25
SSH2-208ENST00000579040 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.25
SSH2-208ENST00000579040 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
SSH2-208ENST00000579040 EPHB4P54760 987 aa13.45□□□□□ -0.26
SSH2-208ENST00000579040 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
SSH2-208ENST00000579040 BRDTQ58F21 947 aaPredicted RBP13.45□□□□□ -0.26
SSH2-208ENST00000579040 ZNF697Q5TEC3 545 aa13.45□□□□□ -0.26
SSH2-208ENST00000579040 RALYLQ86SE5 291 aaKnown RBP13.45□□□□□ -0.26
SSH2-208ENST00000579040 TMEM199Q8N511 208 aa13.45□□□□□ -0.26
SSH2-208ENST00000579040 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
SSH2-208ENST00000579040 MYH7BA7E2Y1 1941 aa13.45□□□□□ -0.26
SSH2-208ENST00000579040 GRIN2DO15399 1336 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 TMEM265A0A087WTH1 108 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 ERICH2A1L162 156 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 PTGS1P23219 599 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 TRAF1Q13077 416 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 TMEM63BQ5T3F8 832 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 OR6J1Q8NGC5 347 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 NCOA7Q8NI08 942 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 SYTL5Q8TDW5 730 aaPredicted RBP13.44□□□□□ -0.26
SSH2-208ENST00000579040 NSUN6Q8TEA1 469 aaKnown RBP13.44□□□□□ -0.26
SSH2-208ENST00000579040 MAP4K1Q92918 833 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 MTMR8Q96EF0 704 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 IWS1Q96ST2 819 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
SSH2-208ENST00000579040 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
SSH2-208ENST00000579040 E7EWF7 191 aa13.43□□□□□ -0.26
SSH2-208ENST00000579040 IFIT3O14879 490 aaKnown RBP13.43□□□□□ -0.26
SSH2-208ENST00000579040 ZBTB5O15062 677 aa13.43□□□□□ -0.26
SSH2-208ENST00000579040 KPNA6O60684 536 aa13.43□□□□□ -0.26
SSH2-208ENST00000579040 PURAQ00577 322 aaKnown RBP13.43□□□□□ -0.26
SSH2-208ENST00000579040 GHRHRQ02643 423 aa13.43□□□□□ -0.26
SSH2-208ENST00000579040 GRM4Q14833 912 aa13.43□□□□□ -0.26
SSH2-208ENST00000579040 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
SSH2-208ENST00000579040 MTG1Q9BT17 334 aaPredicted RBP13.43□□□□□ -0.26
SSH2-208ENST00000579040 PPP1R12CQ9BZL4 782 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms