RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LCORLQ8N3X6 602 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 ZGPATQ8N5A5 531 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 MAGEB6Q8N7X4 407 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 SH3RF3Q8TEJ3 882 aaPredicted RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 OSBP2Q969R2 916 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 TEKT1Q969V4 418 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 CCDC136Q96JN2 1154 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 ROBO3Q96MS0 1386 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 SEC62Q99442 399 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 DNAJC2Q99543 621 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 IDI2Q9BXS1 227 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 GLIS2Q9BZE0 524 aaPredicted RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 PUS7LQ9H0K6 701 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 TDRD3Q9H7E2 651 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 DNAJC18Q9H819 358 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 ZNF532Q9HCE3 1301 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 EPB41L4AQ9HCS5 686 aaPredicted RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 FRRS1LQ9P0K9 344 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 ZNFX1Q9P2E3 1918 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 ZNF70Q9UC06 446 aaPredicted RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 ABCF2Q9UG63 623 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 SCAF8Q9UPN6 1271 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 USP3Q9Y6I4 520 aa4.59□□□□□ -1.67
SMARCE1-215ENST00000578995 FLT1P17948 1338 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 CLRN2A0PK11 232 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 DDTLA6NHG4 134 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 M0R2C6 588 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 ERC2O15083 957 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 IDH1O75874 414 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 NEFLP07196 543 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 ZNF865P0CJ78 1059 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 CYP7A1P22680 504 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 LMOD1P29536 600 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 CACNB3P54284 484 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 TTF1Q15361 905 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 DLGAP5Q15398 846 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 PKN1Q16512 942 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 BMP2KLQ5H9B9 411 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 SLC9C2Q5TAH2 1124 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 SPTY2D1Q68D10 685 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 ZNF589Q86UQ0 364 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 FAM83AQ86UY5 434 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 APPBP2Q92624 585 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 EVI5LQ96CN4 794 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 CDCA5Q96FF9 252 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 FAM227BQ96M60 508 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 STRBPQ96SI9 672 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 TACC3Q9Y6A5 838 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 PCNTO95613 3336 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 PLXNA1Q9UIW2 1896 aa4.58□□□□□ -1.68
SMARCE1-215ENST00000578995 ZMYM6O95789 1325 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 GSG1L2A8MUP6 293 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 B8ZZF3 427 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 RNF113AO15541 343 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 PRKAB2O43741 272 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 ENTPD3O75355 529 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 FRAT2O75474 233 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 MBD4O95243 580 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 CHMLP26374 656 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 RGS3P49796 1198 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 GABPAQ06546 454 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 FSTL1Q12841 308 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 MAP3K12Q12852 859 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 NMIQ13287 307 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 RASA3Q14644 834 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 RRP1BQ14684 758 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 TEAD4Q15561 434 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 MAP3K11Q16584 847 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 TSGA10IPQ3SY00 556 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 EAPPQ56P03 285 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 OXLD1Q5BKU9 147 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 NBPF12Q5TAG4 269 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 VPS53Q5VIR6 699 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 NAA16Q6N069 864 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 LILRA6Q6PI73 481 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 CCDC129Q6ZRS4 1044 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 FAM35AQ86V20 835 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 DZIP1Q86YF9 867 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 APOBEC3FQ8IUX4 373 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 CNTROBQ8N137 903 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 OGFOD1Q8N543 542 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 MIGA1Q8NAN2 632 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 SMC1BQ8NDV3 1235 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 FAM151AQ8WW52 585 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 GPATCH3Q96I76 525 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 TMEM39BQ9GZU3 492 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 OSBPL5Q9H0X9 879 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 DEFB129Q9H1M3 183 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 ARMT1Q9H993 441 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 AATFQ9NY61 560 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 RAI14Q9P0K7 980 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 LRP2BPQ9P2M1 347 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 HDAC9Q9UKV0 1011 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 PPP2R3BQ9Y5P8 575 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 LRRC37A2A6NM11 1700 aa4.57□□□□□ -1.68
SMARCE1-215ENST00000578995 FRMPD3Q5JV73 1810 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 TCP10L2B9ZVM9 353 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 GPAA1O43292 621 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 LDHCP07864 332 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms