RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 BAIAP3O94812 1187 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 GJB5O95377 273 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 PDGFBP01127 241 aaPredicted RBP7.53□□□□□ -1.2
UBB-208ENST00000578706 STAT3P40763 770 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 COL9A2Q14055 689 aaPredicted RBP7.53□□□□□ -1.2
UBB-208ENST00000578706 FSCN1Q16658 493 aaKnown RBP7.53□□□□□ -1.2
UBB-208ENST00000578706 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 CCDC158Q5M9N0 1113 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 ARMCX2Q7L311 632 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 ZNF467Q7Z7K2 595 aaPredicted RBP7.53□□□□□ -1.2
UBB-208ENST00000578706 ADSSL1Q8N142 457 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.53□□□□□ -1.2
UBB-208ENST00000578706 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 ANP32EQ9BTT0 268 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 ABHD16BQ9H3Z7 469 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 SPC25Q9HBM1 224 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 DDX49Q9Y6V7 483 aaKnown RBP7.53□□□□□ -1.2
UBB-208ENST00000578706 OTOGLQ3ZCN5 2332 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 ZFYVE26Q68DK2 2539 aa7.53□□□□□ -1.2
UBB-208ENST00000578706 GPR179Q6PRD1 2367 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 VWA5AO00534 786 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 MPHOSPH10O00566 681 aaKnown RBP7.52□□□□□ -1.21
UBB-208ENST00000578706 GALR2O43603 387 aaPredicted RBP7.52□□□□□ -1.21
UBB-208ENST00000578706 TBX10O75333 385 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 RFC2P35250 354 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 PLCD1P51178 756 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 GABPAQ06546 454 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 G3BP1Q13283 466 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBB-208ENST00000578706 C8orf34Q49A92 452 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 TIGD5Q53EQ6 642 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 TTC39AQ5SRH9 613 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 DGLUCYQ7Z3D6 616 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 FRMD5Q7Z6J6 570 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 RPAINQ86UA6 219 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 TLK2Q86UE8 772 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 SKAP1Q86WV1 359 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 CERS3Q8IU89 383 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 SMC5Q8IY18 1101 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 CCDC144CPQ8IYA2 1237 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 MAGEB6Q8N7X4 407 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 BANK1Q8NDB2 785 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 FBXO22Q8NEZ5 403 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 COL26A1Q96A83 441 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 DDRGK1Q96HY6 314 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 POP1Q99575 1024 aaKnown RBP7.52□□□□□ -1.21
UBB-208ENST00000578706 IRF2BPLQ9H1B7 796 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 CLDND1Q9NY35 253 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 FAM50BQ9Y247 325 aa7.52□□□□□ -1.21
UBB-208ENST00000578706 NOP58Q9Y2X3 529 aaKnown RBP7.52□□□□□ -1.21
UBB-208ENST00000578706 RALGAPA2Q2PPJ7 1873 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 LOC730098B7Z3J9 87 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 STXBP3O00186 592 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 PITPNM1O00562 1244 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 CYP2E1P05181 493 aaPredicted RBP7.51□□□□□ -1.21
UBB-208ENST00000578706 POLR3DP05423 398 aaPredicted RBP7.51□□□□□ -1.21
UBB-208ENST00000578706 SMPD1P17405 629 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 CYP7A1P22680 504 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 TNFAIP2Q03169 654 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 SIGLEC14Q08ET2 396 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 EP400NLQ6ZTU2 488 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 CTAGE1Q96RT6 745 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 RAD9AQ99638 391 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 SEZ6LQ9BYH1 1024 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 FTOQ9C0B1 505 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBB-208ENST00000578706 VCPKMTQ9H867 229 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 PPP1R9AQ9ULJ8 1098 aa7.51□□□□□ -1.21
UBB-208ENST00000578706 WDR46O15213 610 aaKnown RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 KDM4AO75164 1064 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 GNAI3P08754 354 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 GTF2F1P35269 517 aaKnown RBP eCLIP7.5□□□□□ -1.21
UBB-208ENST00000578706 KCNJ6P48051 423 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 HYAL1Q12794 435 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 MKRN4PQ13434 485 aaPredicted RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 SMAD4Q13485 552 aaKnown RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 MTX1Q13505 466 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 CBX2Q14781 532 aaPredicted RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.5□□□□□ -1.21
UBB-208ENST00000578706 TMEM105Q8N8V8 129 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 MIGA1Q8NAN2 632 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 SP7Q8TDD2 431 aaPredicted RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 NKD2Q969F2 451 aaPredicted RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 MEIS3Q99687 375 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 ZBED2Q9BTP6 218 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 NSUN3Q9H649 340 aaKnown RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 SH2D4AQ9H788 454 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 PDGFCQ9NRA1 345 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 ZBTB47Q9UFB7 747 aaPredicted RBP7.5□□□□□ -1.21
UBB-208ENST00000578706 TMX2Q9Y320 296 aa7.5□□□□□ -1.21
UBB-208ENST00000578706 GREB1LQ9C091 1923 aaPredicted RBP7.49□□□□□ -1.21
UBB-208ENST00000578706 H3BNC9 293 aa7.49□□□□□ -1.21
UBB-208ENST00000578706 LINC01565O15544 149 aa7.49□□□□□ -1.21
UBB-208ENST00000578706 DYNC1LI2O43237 492 aaPredicted RBP7.49□□□□□ -1.21
UBB-208ENST00000578706 NBNO60934 754 aa7.49□□□□□ -1.21
UBB-208ENST00000578706 IDH1O75874 414 aaKnown RBP7.49□□□□□ -1.21
UBB-208ENST00000578706 SUPT20HL2P0C7V6 817 aa7.49□□□□□ -1.21
UBB-208ENST00000578706 ARP10275 920 aa7.49□□□□□ -1.21
UBB-208ENST00000578706 HOXB3P14651 431 aaPredicted RBP7.49□□□□□ -1.21
UBB-208ENST00000578706 COPB2P35606 906 aa7.49□□□□□ -1.21
UBB-208ENST00000578706 ZAP70P43403 619 aa7.49□□□□□ -1.21
UBB-208ENST00000578706 CNTN2Q02246 1040 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms