RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 FEZ1Q99689 392 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 PYM1Q9BRP8 204 aaKnown RBP19.25■□□□□ 0.67
SREBF1-218ENST00000578469 PSTPIP2Q9H939 334 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 PCDHA1Q9Y5I3 950 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 WNT7AO00755 349 aa19.24■□□□□ 0.67
SREBF1-218ENST00000578469 PLA2G6O60733 806 aa19.24■□□□□ 0.67
SREBF1-218ENST00000578469 ZBTB48P10074 688 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-218ENST00000578469 STX1AQ16623 288 aa19.24■□□□□ 0.67
SREBF1-218ENST00000578469 KANK3Q6NY19 840 aa19.24■□□□□ 0.67
SREBF1-218ENST00000578469 ELOA2Q8IYF1 753 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-218ENST00000578469 CNNM3Q8NE01 707 aa19.24■□□□□ 0.67
SREBF1-218ENST00000578469 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
SREBF1-218ENST00000578469 VWA3AA6NCI4 1184 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 LONP1P36776 959 aaKnown RBP19.23■□□□□ 0.67
SREBF1-218ENST00000578469 GRIN1Q05586 938 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 FAM83BQ5T0W9 1011 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 KRBA2Q6ZNG9 492 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 TBCKQ8TEA7 893 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 NAP1L4Q99733 375 aaKnown RBP19.23■□□□□ 0.67
SREBF1-218ENST00000578469 PANK2Q9BZ23 570 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 ANO10Q9NW15 660 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 FEM1BQ9UK73 627 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 PRR12Q9ULL5 1215 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
SREBF1-218ENST00000578469 TXLNAP40222 546 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 PRPHP41219 470 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 LETM2Q2VYF4 491 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 SPECC1Q5M775 1068 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 DTHD1Q6ZMT9 781 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 IFNL1Q8IU54 200 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 TEX2Q8IWB9 1127 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 C4orf32Q8N8J7 132 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 FAM200AQ8TCP9 573 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 LPAR1Q92633 364 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 AS3MTQ9HBK9 375 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-218ENST00000578469 KIAA1468Q9P260 1216 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 USP25Q9UHP3 1055 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 ZNF112Q9UJU3 913 aa19.22■□□□□ 0.67
SREBF1-218ENST00000578469 UNCXA6NJT0 531 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 POLR2DO15514 142 aaKnown RBP19.21■□□□□ 0.67
SREBF1-218ENST00000578469 CCNT1O60563 726 aaKnown RBP19.21■□□□□ 0.67
SREBF1-218ENST00000578469 CLK2P49760 499 aaKnown RBP19.21■□□□□ 0.67
SREBF1-218ENST00000578469 CCDC173Q0VFZ6 552 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 ZYXQ15942 572 aaKnown RBP19.21■□□□□ 0.67
SREBF1-218ENST00000578469 ANO6Q4KMQ2 910 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 SCYL3Q8IZE3 742 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 KIAA1683Q9H0B3 1180 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 R3HDMLQ9H3Y0 253 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 PICK1Q9NRD5 415 aa19.21■□□□□ 0.67
SREBF1-218ENST00000578469 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
SREBF1-218ENST00000578469 NEMFO60524 1076 aa19.2■□□□□ 0.66
SREBF1-218ENST00000578469 USP14P54578 494 aa19.2■□□□□ 0.66
SREBF1-218ENST00000578469 AP3B2Q13367 1082 aa19.2■□□□□ 0.66
SREBF1-218ENST00000578469 LONRF3Q496Y0 759 aa19.2■□□□□ 0.66
SREBF1-218ENST00000578469 KIAA1755Q5JYT7 1200 aa19.2■□□□□ 0.66
SREBF1-218ENST00000578469 OTOP1Q7RTM1 612 aa19.2■□□□□ 0.66
SREBF1-218ENST00000578469 WNK4Q96J92 1243 aa19.2■□□□□ 0.66
SREBF1-218ENST00000578469 OR52Z1P0C646 297 aa19.19■□□□□ 0.66
SREBF1-218ENST00000578469 IREB2P48200 963 aaKnown RBP19.19■□□□□ 0.66
SREBF1-218ENST00000578469 UBE2SQ16763 222 aa19.19■□□□□ 0.66
SREBF1-218ENST00000578469 SYMPKQ92797 1274 aaKnown RBP19.19■□□□□ 0.66
SREBF1-218ENST00000578469 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
SREBF1-218ENST00000578469 WRNIP1Q96S55 665 aa19.19■□□□□ 0.66
SREBF1-218ENST00000578469 NAT10Q9H0A0 1025 aaKnown RBP19.19■□□□□ 0.66
SREBF1-218ENST00000578469 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-218ENST00000578469 ATAD5Q96QE3 1844 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 FOSP01100 380 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-218ENST00000578469 GCFC2P16383 781 aaKnown RBP19.18■□□□□ 0.66
SREBF1-218ENST00000578469 INPP5BP32019 993 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 SNAP25P60880 206 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 USH1GQ495M9 461 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 CCDC84Q86UT8 332 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-218ENST00000578469 CEP57L1Q8IYX8 460 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 EPSTI1Q96J88 318 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 WDR18Q9BV38 432 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 RANBP17Q9H2T7 1088 aaKnown RBP19.18■□□□□ 0.66
SREBF1-218ENST00000578469 SERTAD1Q9UHV2 236 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 FZD1Q9UP38 647 aa19.18■□□□□ 0.66
SREBF1-218ENST00000578469 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-218ENST00000578469 ZNF165P49910 485 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 NLRP12P59046 1061 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 PPP4R3AQ6IN85 833 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 USP49Q70CQ1 688 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 PDILTQ8N807 584 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 IQUBQ8NA54 791 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 CLMNQ96JQ2 1002 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 AK8Q96MA6 479 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 DNAJC25Q9H1X3 360 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 TMEM60Q9H2L4 133 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 SSC5DA1L4H1 1573 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 HTTP42858 3142 aa19.17■□□□□ 0.66
SREBF1-218ENST00000578469 IGF2BP3O00425 579 aaKnown RBP eCLIP19.16■□□□□ 0.66
SREBF1-218ENST00000578469 IL17AQ16552 155 aa19.16■□□□□ 0.66
SREBF1-218ENST00000578469 DHX58Q96C10 678 aa19.16■□□□□ 0.66
SREBF1-218ENST00000578469 PPP1R9BQ96SB3 815 aa19.16■□□□□ 0.66
SREBF1-218ENST00000578469 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms