RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	RANBP6	O60518	1105 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TOP1	P11387	765 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	MYOG	P15173	224 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ALDH5A1	P51649	535 aa	Predicted RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	RPS6	P62753	249 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PURA	Q00577	322 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TNFAIP2	Q03169	654 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PTH1R	Q03431	593 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	FPGS	Q05932	587 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PDE4B	Q07343	736 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	MKRN4P	Q13434	485 aa	Predicted RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	FSCN1	Q16658	493 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	GNAS	Q5JWF2	1037 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	AKNAD1	Q5T1N1	836 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SYDE2	Q5VT97	1194 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	B4GALNT3	Q6L9W6	998 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CYB5R4	Q7L1T6	521 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TLK2	Q86UE8	772 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	FAM160B2	Q86V87	743 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CHD1L	Q86WJ1	897 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SKAP1	Q86WV1	359 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ANKRD35	Q8N283	1001 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	STAG2	Q8N3U4	1231 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ENAH	Q8N8S7	591 aa	Predicted RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	DCAF4	Q8WV16	495 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	DHX38	Q92620	1227 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	KAT2B	Q92831	832 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	MTMR8	Q96EF0	704 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PPP1R12C	Q9BZL4	782 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	UBA5	Q9GZZ9	404 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	STARD7	Q9NQZ5	370 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	BRWD1	Q9NSI6	2320 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TRMT13	Q9NUP7	481 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TMEM39A	Q9NV64	488 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SLC5A4	Q9NY91	659 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	BAZ2B	Q9UIF8	2168 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	STX8	Q9UNK0	236 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	MTMR7	Q9Y216	660 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CNPY2	Q9Y2B0	182 aa		5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.27	□□□□□ -1.57
PPP4R1-209	ENST00000578329	XIRP2	A4UGR9	3374 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329		A0A0U1RQG5	324 aa	Predicted RBP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329		A6NJR5	290 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TSPY2	A6NKD2	308 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329		B4E1Z4	1266 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	DYNC1LI2	O43237	492 aa	Predicted RBP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CYTH3	O43739	400 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CYP2C9	P11712	490 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	RAG1	P15918	1043 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	DNAJB2	P25686	324 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	RABGGTB	P53611	331 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CCL23	P55773	120 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ANTXR2	P58335	489 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	GHRHR	Q02643	423 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ARHGAP1	Q07960	439 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ITGA7	Q13683	1181 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TTLL4	Q14679	1199 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	MBTPS1	Q14703	1052 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TRIM71	Q2Q1W2	868 aa	Known RBP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TKFC	Q3LXA3	575 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	DUSP28	Q4G0W2	176 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	NSMF	Q6X4W1	530 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	AMOTL1	Q8IY63	956 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	IL31RA	Q8NI17	732 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CHURC1	Q8WUH1	139 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	HERVK_113	Q902F9	699 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	DDRGK1	Q96HY6	314 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SCLY	Q96I15	445 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	GPATCH3	Q96I76	525 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	RNPC3	Q96LT9	517 aa	Known RBP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TAAR1	Q96RJ0	339 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	NACAP1	Q9BZK3	213 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	JMJD4	Q9H9V9	463 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	GPHN	Q9NQX3	736 aa	Predicted RBP	5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ZSWIM5	Q9P217	1185 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	FBXO40	Q9UH90	709 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CCPG1	Q9ULG6	757 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	KIAA1217	Q5T5P2	1943 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TANC1	Q9C0D5	1861 aa		5.26	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TRIP12	Q14669	1992 aa	Predicted RBP	5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	WDR19	Q8NEZ3	1342 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	COL4A6	Q14031	1691 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	RFXAP	O00287	272 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	LPXN	O60711	386 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	KDM4A	O75164	1064 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	FDX1	P10109	184 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SP2	Q02086	613 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	SEMA3F	Q13275	785 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	QRICH1	Q2TAL8	776 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	RRP12	Q5JTH9	1297 aa	Known RBP	5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	ZNF697	Q5TEC3	545 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	KRT40	Q6A162	431 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	IQSEC1	Q6DN90	963 aa		5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	CWC27	Q6UX04	472 aa	Known RBP	5.25	□□□□□ -1.57
PPP4R1-209	ENST00000578329	TMCO2	Q7Z6W1	182 aa	Predicted RBP	5.25	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms