RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 WDR5P61964 334 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 BFSP2Q13515 415 aa16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 VTA1Q9NP79 307 aa16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 RNF146Q9NTX7 359 aa16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
PPP4R1-206ENST00000577779 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 H3BQ06 376 aaPredicted RBP16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 CPT1AP50416 773 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 DUSP28Q4G0W2 176 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 CTR9Q6PD62 1173 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 PPP1R13LQ8WUF5 828 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 RAD9AQ99638 391 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 NOD1Q9Y239 953 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 SIP14410 1827 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 SCN10AQ9Y5Y9 1956 aa16.88■□□□□ 0.29
PPP4R1-206ENST00000577779 LINC01553A4QN01 128 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 FDX1P10109 184 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 DEFB103AP81534 67 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 ZP2Q05996 745 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 TMEM57Q8N5G2 664 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 CRBNQ96SW2 442 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 MKNK2Q9HBH9 465 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 FAM50BQ9Y247 325 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
PPP4R1-206ENST00000577779 TRIP12Q14669 1992 aaPredicted RBP16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 RASA1P20936 1047 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 ADD2P35612 726 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 LRRFIP1Q32MZ4 808 aaKnown RBP16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 TKFCQ3LXA3 575 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 NFRKBQ6P4R8 1299 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 STK11IPQ8N1F8 1099 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 TRERF1Q96PN7 1200 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 WDR11Q9BZH6 1224 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 PRKAG3Q9UGI9 489 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 ISY1Q9ULR0 285 aaKnown RBP16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 CACNA1HO95180 2353 aa16.86■□□□□ 0.29
PPP4R1-206ENST00000577779 GJB5O95377 273 aa16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 ALAS1P13196 640 aa16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 BRDTQ58F21 947 aaPredicted RBP16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 CCDC155Q8N6L0 562 aa16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 UPF3BQ9BZI7 483 aaKnown RBP16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 IL1RAPL2Q9NP60 686 aa16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
PPP4R1-206ENST00000577779 MYO15AQ9UKN7 3530 aa16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 BMP3P12645 472 aa16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 PTPN11Q06124 597 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 EP400NLQ6ZTU2 488 aa16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 RPAP2Q8IXW5 612 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 FBXO22Q8NEZ5 403 aa16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 OR6J1Q8NGC5 347 aa16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 CTNNA3Q9UI47 895 aa16.84■□□□□ 0.29
PPP4R1-206ENST00000577779 C19orf67A6NJJ6 358 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 STAT2P52630 851 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 PTPN5P54829 565 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 FOXK2Q01167 660 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 IKQ13123 557 aaPredicted RBP16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 SLFN13Q68D06 897 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 FAM117BQ6P1L5 589 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 CNKSR3Q6P9H4 555 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 ADHFE1Q8IWW8 467 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 GMCL1P1Q8NEA9 526 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 PRSS33Q8NF86 280 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 MORC4Q8TE76 937 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 RAD50Q92878 1312 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 MKL1Q969V6 931 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 MRPL38Q96DV4 380 aaKnown RBP16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 PAG1Q9NWQ8 432 aa16.83■□□□□ 0.28
PPP4R1-206ENST00000577779 PTPRZ1P23471 2315 aaPredicted RBP16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 TECTAO75443 2155 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 KPNA6O60684 536 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 CHMP4BP1P59074 171 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 PTGISQ16647 500 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 PTPROQ16827 1216 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 TIGD5Q53EQ6 642 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 MUM1L1Q5H9M0 696 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 NSMFQ6X4W1 530 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 CHURC1Q8WUH1 139 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 PABPC5Q96DU9 382 aaKnown RBP16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 CEP95Q96GE4 821 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 PURBQ96QR8 312 aaKnown RBP16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 C17orf80Q9BSJ5 609 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 SYNPO2Q9UMS6 1093 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 VPS13AQ96RL7 3174 aa16.82■□□□□ 0.28
PPP4R1-206ENST00000577779 LCTP09848 1927 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms