RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 ERCC3P19447 782 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 RFX1P22670 979 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 PLS1Q14651 629 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 KCTD2Q14681 263 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 BMP2KLQ5H9B9 411 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 KIAA1755Q5JYT7 1200 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 WDR78Q5VTH9 848 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 OLFML2BQ68BL8 750 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 DPP9Q86TI2 863 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 MSL3Q8N5Y2 521 aaKnown RBP8.28□□□□□ -1.08
CASC3-205ENST00000577605 CHST13Q8NET6 341 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 ANKS1AQ92625 1134 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 EMID1Q96A84 441 aaPredicted RBP8.28□□□□□ -1.08
CASC3-205ENST00000577605 ATG4CQ96DT6 458 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 CCDC136Q96JN2 1154 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 PORCNQ9H237 461 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 PAK6Q9NQU5 681 aaPredicted RBP8.28□□□□□ -1.08
CASC3-205ENST00000577605 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 IL17RBQ9NRM6 502 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 PCNTO95613 3336 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 SGSM2O43147 1006 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 CYP2B6P20813 491 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 GUCA2AQ02747 115 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 TMEM132BQ14DG7 1078 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 RRP12Q5JTH9 1297 aaKnown RBP8.27□□□□□ -1.09
CASC3-205ENST00000577605 GPATCH4Q5T3I0 446 aaKnown RBP8.27□□□□□ -1.09
CASC3-205ENST00000577605 MAP3K21Q5TCX8 1036 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 BRICD5Q6PL45 260 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 BTNL9Q6UXG8 535 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 CLEC10AQ8IUN9 316 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 FAM160A2Q8N612 972 aaPredicted RBP8.27□□□□□ -1.09
CASC3-205ENST00000577605 U2AF1L4Q8WU68 220 aaKnown RBP8.27□□□□□ -1.09
CASC3-205ENST00000577605 MTA3Q9BTC8 594 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 HTATIP2Q9BUP3 242 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 VRTNQ9H8Y1 702 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 SLC38A10Q9HBR0 1119 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 IGSF5Q9NSI5 407 aa8.27□□□□□ -1.09
CASC3-205ENST00000577605 ZNF214Q9UL59 606 aaPredicted RBP8.27□□□□□ -1.09
CASC3-205ENST00000577605 ATAD5Q96QE3 1844 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 TMEM232C9JQI7 657 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 TFRCP02786 760 aaKnown RBP8.26□□□□□ -1.09
CASC3-205ENST00000577605 ELNP15502 786 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 EN2P19622 333 aaPredicted RBP8.26□□□□□ -1.09
CASC3-205ENST00000577605 MCCP23508 829 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 ADORA2AP29274 412 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 SLC19A1P41440 591 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 HAND2P61296 217 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 TRAF1Q13077 416 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 IKQ13123 557 aaPredicted RBP8.26□□□□□ -1.09
CASC3-205ENST00000577605 SART3Q15020 963 aaKnown RBP8.26□□□□□ -1.09
CASC3-205ENST00000577605 MTFR1Q15390 333 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 TUSC1Q2TAM9 212 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 PLA2G2CQ5R387 149 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
CASC3-205ENST00000577605 REPS2Q8NFH8 660 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 TRIB2Q92519 343 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 MAP4K1Q92918 833 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 KIFC2Q96AC6 838 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 DDX11Q96FC9 970 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 ZSCAN10Q96SZ4 725 aaPredicted RBP8.26□□□□□ -1.09
CASC3-205ENST00000577605 MMP19Q99542 508 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 TMEM47Q9BQJ4 181 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 UBAC1Q9BSL1 405 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.26□□□□□ -1.09
CASC3-205ENST00000577605 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 KAT14Q9H8E8 782 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 MYH7P12883 1935 aa8.26□□□□□ -1.09
CASC3-205ENST00000577605 LOC102724159A0A0B4J2E5 919 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 RBM47A0AV96 593 aaKnown RBP8.25□□□□□ -1.09
CASC3-205ENST00000577605 ERICH2A1L162 156 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 PWP2Q15269 919 aaKnown RBP8.25□□□□□ -1.09
CASC3-205ENST00000577605 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 SNRNP48Q6IEG0 339 aaKnown RBP8.25□□□□□ -1.09
CASC3-205ENST00000577605 RALYLQ86SE5 291 aaKnown RBP8.25□□□□□ -1.09
CASC3-205ENST00000577605 TBC1D10CQ8IV04 446 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 TMTC2Q8N394 836 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 NCOA7Q8NI08 942 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 INCENPQ9NQS7 918 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 FBXO28Q9NVF7 368 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 ZSWIM5Q9P217 1185 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 OGDHLQ9ULD0 1010 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 PFASO15067 1338 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 PTPRFP10586 1907 aa8.25□□□□□ -1.09
CASC3-205ENST00000577605 CARNS1A5YM72 827 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 EPB41L2O43491 1005 aaKnown RBP8.24□□□□□ -1.09
CASC3-205ENST00000577605 EIF5BO60841 1220 aaKnown RBP8.24□□□□□ -1.09
CASC3-205ENST00000577605 IGHA2P01877 340 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 SNHG28P0DPA3 235 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 PDHBP11177 359 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 CACNB2Q08289 660 aaPredicted RBP8.24□□□□□ -1.09
CASC3-205ENST00000577605 CCDC96Q2M329 555 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 ZNF792Q3KQV3 632 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 MSS51Q4VC12 460 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 ASPRV1Q53RT3 343 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 ANKRD35Q8N283 1001 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 MAML3Q96JK9 1138 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 DEFB118Q96PH6 123 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms