RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 CALML3P27482 149 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 NKX3-2P78367 333 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 RNF180Q86T96 592 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 TBC1D5Q92609 795 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 TSEN34Q9BSV6 310 aaKnown RBP16.22■□□□□ 0.19
GGA3-203ENST00000577435 SPZ1Q9BXG8 430 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 SENP6Q9GZR1 1112 aaPredicted RBP16.22■□□□□ 0.19
GGA3-203ENST00000577435 VTA1Q9NP79 307 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
GGA3-203ENST00000577435 H0YGN5 161 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 EDNRBP24530 442 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 IQSEC1Q6DN90 963 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 TAPT1Q6NXT6 567 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 KLHDC9Q8NEP7 349 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 SYTL5Q8TDW5 730 aaPredicted RBP16.21■□□□□ 0.19
GGA3-203ENST00000577435 PIGSQ96S52 555 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
GGA3-203ENST00000577435 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 LRRC2Q9BYS8 371 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 UPF3AQ9H1J1 476 aaKnown RBP16.21■□□□□ 0.19
GGA3-203ENST00000577435 PHF24Q9UPV7 400 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
GGA3-203ENST00000577435 RBM47A0AV96 593 aaKnown RBP16.2■□□□□ 0.18
GGA3-203ENST00000577435 B4DLN1 442 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 OPLAHO14841 1288 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 ADCY6O43306 1168 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 PGK1P00558 417 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 CST5P28325 142 aaPredicted RBP16.2■□□□□ 0.18
GGA3-203ENST00000577435 HSD17B4P51659 736 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 MRPL12P52815 198 aaKnown RBP16.2■□□□□ 0.18
GGA3-203ENST00000577435 GJA9P57773 515 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
GGA3-203ENST00000577435 FBXL16Q8N461 479 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 GNEQ9Y223 722 aaKnown RBP16.2■□□□□ 0.18
GGA3-203ENST00000577435 Q9Y3F1 56 aa16.2■□□□□ 0.18
GGA3-203ENST00000577435 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 C1orf53Q5VUE5 145 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 SRBD1Q8N5C6 995 aaKnown RBP16.19■□□□□ 0.18
GGA3-203ENST00000577435 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
GGA3-203ENST00000577435 TAAR1Q96RJ0 339 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 DDX49Q9Y6V7 483 aaKnown RBP16.19■□□□□ 0.18
GGA3-203ENST00000577435 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
GGA3-203ENST00000577435 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 SMPD1P17405 629 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 PSMA5P28066 241 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 RCAN1P53805 252 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 SNX17Q15036 470 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 SLC39A5Q6ZMH5 540 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
GGA3-203ENST00000577435 RRP36Q96EU6 259 aaKnown RBP16.18■□□□□ 0.18
GGA3-203ENST00000577435 JAKMIP1Q96N16 626 aaKnown RBP16.18■□□□□ 0.18
GGA3-203ENST00000577435 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 PDGFCQ9NRA1 345 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 COL20A1Q9P218 1284 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 LRRC37A2A6NM11 1700 aa16.18■□□□□ 0.18
GGA3-203ENST00000577435 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.17■□□□□ 0.18
GGA3-203ENST00000577435 CTAGE5O15320 804 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 PLEKHA8P1O95397 391 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 CFBP00751 764 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 PDE4DQ08499 809 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 DUSP28Q4G0W2 176 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 BLOC1S2Q6QNY1 142 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 EEPD1Q7L9B9 569 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 FBXO16Q8IX29 292 aaPredicted RBP16.17■□□□□ 0.18
GGA3-203ENST00000577435 PCSK9Q8NBP7 692 aaKnown RBP16.17■□□□□ 0.18
GGA3-203ENST00000577435 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 RMDN3Q96TC7 470 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 RBM28Q9NW13 759 aaKnown RBP16.17■□□□□ 0.18
GGA3-203ENST00000577435 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
GGA3-203ENST00000577435 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
GGA3-203ENST00000577435 RXRAP19793 462 aa16.16■□□□□ 0.18
GGA3-203ENST00000577435 ACLYP53396 1101 aa16.16■□□□□ 0.18
GGA3-203ENST00000577435 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
GGA3-203ENST00000577435 KCNA10Q16322 511 aa16.16■□□□□ 0.18
GGA3-203ENST00000577435 TMTC3Q6ZXV5 915 aa16.16■□□□□ 0.18
GGA3-203ENST00000577435 C7orf61Q8IZ16 206 aa16.16■□□□□ 0.18
GGA3-203ENST00000577435 TRIOBPQ9H2D6 2365 aa16.16■□□□□ 0.18
GGA3-203ENST00000577435 RANBP2P49792 3224 aaKnown RBP16.16■□□□□ 0.18
GGA3-203ENST00000577435 KIAA1217Q5T5P2 1943 aa16.15■□□□□ 0.18
GGA3-203ENST00000577435 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
GGA3-203ENST00000577435 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
GGA3-203ENST00000577435 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
GGA3-203ENST00000577435 ZBTB43O43298 467 aa16.15■□□□□ 0.18
GGA3-203ENST00000577435 C6orf222P0C671 652 aaPredicted RBP16.15■□□□□ 0.18
GGA3-203ENST00000577435 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
GGA3-203ENST00000577435 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
GGA3-203ENST00000577435 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
GGA3-203ENST00000577435 STXBP2Q15833 593 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms