RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
CDH8-202ENST00000577228 PRUNE2Q8WUY3 3088 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 LOC102724159A0A0B4J2E5 919 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 PTPDC1A2A3K4 754 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 NFIBO00712 420 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 FGRP09769 529 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 IGFBP4P22692 258 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 ADGRE1Q14246 886 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 PWP2Q15269 919 aaKnown RBP13.92□□□□□ -0.18
CDH8-202ENST00000577228 TMEM47Q9BQJ4 181 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 WDR11Q9BZH6 1224 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 ALDH8A1Q9H2A2 487 aaPredicted RBP13.92□□□□□ -0.18
CDH8-202ENST00000577228 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 POLR3EQ9NVU0 708 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 THEGQ9P2T0 379 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 YBX2Q9Y2T7 364 aaKnown RBP13.92□□□□□ -0.18
CDH8-202ENST00000577228 SLC4A7Q9Y6M7 1214 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 MYO9BQ13459 2157 aa13.92□□□□□ -0.18
CDH8-202ENST00000577228 ZBBXA8MT70 800 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 MYL3P08590 195 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 SUPT20HL2P0C7V6 817 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 CALML3P27482 149 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 CPT1AP50416 773 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 CCDC85BQ15834 202 aaPredicted RBP13.91□□□□□ -0.18
CDH8-202ENST00000577228 ANKRD45Q5TZF3 282 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 SLC30A10Q6XR72 485 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 ATXN2LQ8WWM7 1075 aaKnown RBP13.91□□□□□ -0.18
CDH8-202ENST00000577228 SCLYQ96I15 445 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 TRMT13Q9NUP7 481 aaKnown RBP13.91□□□□□ -0.18
CDH8-202ENST00000577228 PNMA2Q9UL42 364 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 VCANP13611 3396 aa13.91□□□□□ -0.18
CDH8-202ENST00000577228 TNKSO95271 1327 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 RBM47A0AV96 593 aaKnown RBP13.9□□□□□ -0.18
CDH8-202ENST00000577228 TNFRSF10AO00220 468 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 FGAP02671 866 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 CYP2C9P11712 490 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 RABGGTBP53611 331 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 PURAQ00577 322 aaKnown RBP13.9□□□□□ -0.18
CDH8-202ENST00000577228 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 BRDTQ58F21 947 aaPredicted RBP13.9□□□□□ -0.18
CDH8-202ENST00000577228 PPP2R2DQ66LE6 453 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 RNF207Q6ZRF8 634 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 OR6J1Q8NGC5 347 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 CLEC4DQ8WXI8 215 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 FAM227BQ96M60 508 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
CDH8-202ENST00000577228 MTG1Q9BT17 334 aaPredicted RBP13.9□□□□□ -0.18
CDH8-202ENST00000577228 GPHNQ9NQX3 736 aaPredicted RBP13.9□□□□□ -0.18
CDH8-202ENST00000577228 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
CDH8-202ENST00000577228 RAD50Q92878 1312 aa13.9□□□□□ -0.19
CDH8-202ENST00000577228 PFKMP08237 780 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 PDHBP11177 359 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 ATP2A2P16615 1042 aaKnown RBP13.89□□□□□ -0.19
CDH8-202ENST00000577228 PDE1AP54750 535 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 HAND2P61296 217 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 PDE4DQ08499 809 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 PPP2R5BQ15173 497 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 ASB2Q96Q27 587 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 PCDHA11Q9Y5I1 949 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 GBF1Q92538 1859 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 ZMYM6O95789 1325 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 WDR19Q8NEZ3 1342 aa13.89□□□□□ -0.19
CDH8-202ENST00000577228 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDH8-202ENST00000577228 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
CDH8-202ENST00000577228 MYOGP15173 224 aa13.88□□□□□ -0.19
CDH8-202ENST00000577228 RPS6P62753 249 aaKnown RBP13.88□□□□□ -0.19
CDH8-202ENST00000577228 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
CDH8-202ENST00000577228 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
CDH8-202ENST00000577228 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
CDH8-202ENST00000577228 DEFB128Q7Z7B8 93 aa13.88□□□□□ -0.19
CDH8-202ENST00000577228 SCFD2Q8WU76 684 aa13.88□□□□□ -0.19
CDH8-202ENST00000577228 VWCEQ96DN2 955 aa13.88□□□□□ -0.19
CDH8-202ENST00000577228 SPTBN5Q9NRC6 3674 aaKnown RBP13.88□□□□□ -0.19
CDH8-202ENST00000577228 KPNA6O60684 536 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 PCP11498 1178 aaKnown RBP13.87□□□□□ -0.19
CDH8-202ENST00000577228 ACTN1P12814 892 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 EDNRBP24530 442 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 NMIQ13287 307 aaPredicted RBP13.87□□□□□ -0.19
CDH8-202ENST00000577228 NBPF20Q3BBV1 942 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 MFSD6Q6ZSS7 791 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
CDH8-202ENST00000577228 TICAM2Q86XR7 235 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 DNERQ8NFT8 737 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 TTC14Q96N46 770 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 CCDC171Q6TFL3 1326 aa13.87□□□□□ -0.19
CDH8-202ENST00000577228 B4DLN1 442 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 RFC2P35250 354 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
CDH8-202ENST00000577228 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
CDH8-202ENST00000577228 TMEM67Q5HYA8 995 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 NFRKBQ6P4R8 1299 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 RETREG2Q8NC44 543 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms