RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 CALM1P0DP23 149 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 CALM2P0DP24 149 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 CALM3P0DP25 149 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 RFC4P35249 363 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 EIF4A3P38919 411 aaKnown RBP16.52■□□□□ 0.24
PRPF8-216ENST00000577001 KCNJ6P48051 423 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 ATP1A2P50993 1020 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
PRPF8-216ENST00000577001 MFSD14BQ5SR56 506 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 TAF3Q5VWG9 929 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 USP17L6PQ6QN14 398 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 SND1Q7KZF4 910 aaKnown RBP eCLIP16.52■□□□□ 0.242e-9■□□□□ 10.9
PRPF8-216ENST00000577001 CCDC148Q8NFR7 591 aa16.52■□□□□ 0.24
PRPF8-216ENST00000577001 DMGDHQ9UI17 866 aaKnown RBP16.52■□□□□ 0.24
PRPF8-216ENST00000577001 KLRC4O43908 158 aa16.52■□□□□ 0.23
PRPF8-216ENST00000577001 DDAH1O94760 285 aa16.52■□□□□ 0.23
PRPF8-216ENST00000577001 CDK8P49336 464 aa16.52■□□□□ 0.23
PRPF8-216ENST00000577001 GUCY2FP51841 1108 aa16.52■□□□□ 0.23
PRPF8-216ENST00000577001 DPP8Q6V1X1 898 aaPredicted RBP16.52■□□□□ 0.23
PRPF8-216ENST00000577001 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.23
PRPF8-216ENST00000577001 CACNA2D4Q7Z3S7 1137 aa16.52■□□□□ 0.23
PRPF8-216ENST00000577001 SEC63Q9UGP8 760 aaKnown RBP16.52■□□□□ 0.23
PRPF8-216ENST00000577001 LIMA1Q9UHB6 759 aaKnown RBP16.52■□□□□ 0.23
PRPF8-216ENST00000577001 SFI1A8K8P3 1242 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 STXBP3O00186 592 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 GPS2Q13227 327 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 SEMA6BQ9H3T3 888 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 TOGARAM1Q9Y4F4 1720 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 MYMKA6NI61 221 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 ADAT2Q7Z6V5 191 aaKnown RBP16.51■□□□□ 0.23
PRPF8-216ENST00000577001 SNX29Q8TEQ0 813 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 LRRC1Q9BTT6 524 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 CALCOCO1Q9P1Z2 691 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 CCDC151A5D8V7 595 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 RASA1P20936 1047 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 GGCXP38435 758 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 KIAA0895Q8NCT3 520 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
PRPF8-216ENST00000577001 SALL4Q9UJQ4 1053 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 HYOU1Q9Y4L1 999 aa16.51■□□□□ 0.23
PRPF8-216ENST00000577001 E9PMD0 336 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 TRAF5O00463 557 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 BACH1O14867 736 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 RNF40O75150 1001 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 ERLIN1O75477 346 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 UBXN2AP68543 259 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 PLS1Q14651 629 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 SH2D3CQ8N5H7 860 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 ANAPC4Q9UJX5 808 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 L1RE1Q9UN81 338 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 LGALS16A8MUM7 142 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 TMCO5BA8MYB1 307 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 RBM5P52756 815 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRPF8-216ENST00000577001 CYP4A11Q02928 519 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 ECM1Q16610 540 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 USH1GQ495M9 461 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 P2RX5Q93086 422 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 LRRC53A6NM62 1247 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 SPA17Q15506 151 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 TTI2Q6NXR4 508 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 LEKR1Q6ZMV7 388 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 ZSCAN29Q8IWY8 852 aaPredicted RBP16.5■□□□□ 0.23
PRPF8-216ENST00000577001 KCNQ5Q9NR82 932 aa16.5■□□□□ 0.23
PRPF8-216ENST00000577001 MYH7P12883 1935 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 UBAP1LF5GYI3 381 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 H7C1D1 291 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
PRPF8-216ENST00000577001 CALML3P27482 149 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 GPSM2P81274 684 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 NONOQ15233 471 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRPF8-216ENST00000577001 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 AK7Q96M32 723 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
PRPF8-216ENST00000577001 ACTN1P12814 892 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 KIF5AQ12840 1032 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 CCDC181Q5TID7 509 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 TCERG1LQ5VWI1 586 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 ATP8A2Q9NTI2 1148 aa16.49■□□□□ 0.23
PRPF8-216ENST00000577001 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
PRPF8-216ENST00000577001 AKR1B1P15121 316 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 LONP1P36776 959 aaKnown RBP16.48■□□□□ 0.23
PRPF8-216ENST00000577001 KLHL7Q8IXQ5 586 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 TMEM51Q9NW97 253 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 RMND1Q9NWS8 449 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
PRPF8-216ENST00000577001 NUP98P52948 1817 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 MYH10P35580 1976 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 CALCRLQ16602 461 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms