RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 WDR66Q8TBY9 1149 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 MMS19Q96T76 1030 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 AMFRQ9UKV5 643 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 PCDHA13Q9Y5I0 950 aa19.69■□□□□ 0.74
ATPAF1-214ENST00000576409 PLEKHG1Q9ULL1 1385 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 A0A087WUV0 522 aaPredicted RBP19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 GSG1L2A8MUP6 293 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 CCNE1P24864 410 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 MFSD14BQ5SR56 506 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 REXO1L1PQ8IX06 675 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 SLC44A5Q8NCS7 719 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 MICAL1Q8TDZ2 1067 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 LARP4BQ92615 738 aaKnown RBP19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 NYXQ9GZU5 481 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 NDST4Q9H3R1 872 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 ATG3Q9NT62 314 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 CCDC169A6NNP5 214 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 MEIS1O00470 390 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 PRPF3O43395 683 aaKnown RBP19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 TAB3Q8N5C8 712 aaPredicted RBP19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 FBXO2Q9UK22 296 aaPredicted RBP19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 RIPOR2Q9Y4F9 1068 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 A0A1B0GUA9 196 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 EPHB4P54760 987 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 DENND2CQ68D51 928 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 DISC1Q9NRI5 854 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 PCDHA4Q9UN74 947 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 CD2APQ9Y5K6 639 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 FHOD1Q9Y613 1164 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 FAM169AQ9Y6X4 670 aa19.68■□□□□ 0.74
ATPAF1-214ENST00000576409 CLIC2O15247 247 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 GTF2IP78347 998 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 SUSD4Q5VX71 490 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 INTS8Q75QN2 995 aaKnown RBP19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 PROCA1Q8NCQ7 364 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 PIGSQ96S52 555 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 STMN4Q9H169 189 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 VEZTQ9HBM0 779 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 TSKSQ9UJT2 592 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 GKAP1Q5VSY0 366 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 IQCGQ9H095 443 aaKnown RBP19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 FAM184BQ9ULE4 1060 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 DDAH1O94760 285 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 HAUS3Q68CZ6 603 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 SH2D3CQ8N5H7 860 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 GPR101Q96P66 508 aaPredicted RBP19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 SYNCQ9H7C4 482 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 HPS5Q9UPZ3 1129 aa19.67■□□□□ 0.74
ATPAF1-214ENST00000576409 PRDX5P30044 214 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 CNBD1Q8NA66 436 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 DHTKD1Q96HY7 919 aaPredicted RBP19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 PTPN22Q9Y2R2 807 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 TBC1D8O95759 1140 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 NR2F2P24468 414 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 SCNN1DP51172 638 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 PLTPP55058 493 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 LACTBP83111 547 aaPredicted RBP19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 BIRC3Q13489 604 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 ZKSCAN8Q15776 578 aaPredicted RBP19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 EFCAB13Q8IY85 973 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 PSTPIP2Q9H939 334 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 TUBE1Q9UJT0 475 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 PCK1P35558 622 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 SETDB1Q15047 1291 aa19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 RABL6Q3YEC7 729 aaPredicted RBP19.66■□□□□ 0.74
ATPAF1-214ENST00000576409 LRRN2O75325 713 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 DPP8Q6V1X1 898 aaPredicted RBP19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 TMC4Q7Z404 712 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 AGPAT5Q9NUQ2 364 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 NOVA2Q9UNW9 492 aaKnown RBP19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 A6NNZ2 444 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 PEX19P40855 299 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 RFX5P48382 616 aaPredicted RBP19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 PDIA6Q15084 440 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 TUBB8Q3ZCM7 444 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 ZNF365Q70YC5 407 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 L2HGDHQ9H9P8 463 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 GFPT1Q06210 699 aaPredicted RBP19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 CPXCR1Q8N123 301 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 PAF1Q8N7H5 531 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 MAN2A1Q16706 1144 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 IGDCC4Q8TDY8 1250 aa19.65■□□□□ 0.74
ATPAF1-214ENST00000576409 LGALS16A8MUM7 142 aa19.64■□□□□ 0.74
ATPAF1-214ENST00000576409 MAGEA9P43362 315 aa19.64■□□□□ 0.74
ATPAF1-214ENST00000576409 DHX9Q08211 1270 aaKnown RBP19.64■□□□□ 0.74
ATPAF1-214ENST00000576409 EXOC3L4Q17RC7 722 aa19.64■□□□□ 0.74
ATPAF1-214ENST00000576409 POTEMA6NI47 508 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 FCER1AP12319 257 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 NR1D1P20393 614 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 CRKLP46109 303 aaKnown RBP19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 TRAPPC10P48553 1259 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 NAP1L3Q99457 506 aaPredicted RBP19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 EHMT1Q9H9B1 1298 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 DDX25Q9UHL0 483 aaKnown RBP19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 FKBP3Q00688 224 aaKnown RBP19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 UBE2SQ16763 222 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 FAM182BQ5T319 152 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 TADA2BQ86TJ2 420 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 PNKPQ96T60 521 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms