RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FANCBQ8NB91 859 aa27.25■■□□□ 1.95
SNF8-217ENST00000576353 TCEANC2Q96MN5 208 aa27.25■■□□□ 1.95
SNF8-217ENST00000576353 KATNBL1Q9H079 304 aa27.25■■□□□ 1.95
SNF8-217ENST00000576353 PPP1R11O60927 126 aaPredicted RBP27.24■■□□□ 1.95
SNF8-217ENST00000576353 MYCNP04198 464 aaPredicted RBP27.24■■□□□ 1.95
SNF8-217ENST00000576353 GJC2Q5T442 439 aaPredicted RBP27.24■■□□□ 1.95
SNF8-217ENST00000576353 RNF180Q86T96 592 aa27.24■■□□□ 1.95
SNF8-217ENST00000576353 RRP36Q96EU6 259 aaKnown RBP27.24■■□□□ 1.95
SNF8-217ENST00000576353 DUSP11O75319 330 aaKnown RBP27.23■■□□□ 1.95
SNF8-217ENST00000576353 RXRAP19793 462 aa27.23■■□□□ 1.95
SNF8-217ENST00000576353 LRRC41Q15345 812 aa27.23■■□□□ 1.95
SNF8-217ENST00000576353 APOA5Q6Q788 366 aa27.23■■□□□ 1.95
SNF8-217ENST00000576353 MICU3Q86XE3 530 aa27.23■■□□□ 1.95
SNF8-217ENST00000576353 VTA1Q9NP79 307 aa27.23■■□□□ 1.95
SNF8-217ENST00000576353 MAP3K20Q9NYL2 800 aaKnown RBP27.23■■□□□ 1.95
SNF8-217ENST00000576353 NR2E3Q9Y5X4 410 aa27.23■■□□□ 1.95
SNF8-217ENST00000576353 SMCHD1A6NHR9 2005 aa27.23■■□□□ 1.95
SNF8-217ENST00000576353 EVI5O60447 810 aa27.22■■□□□ 1.95
SNF8-217ENST00000576353 EIF5BO60841 1220 aaKnown RBP27.22■■□□□ 1.95
SNF8-217ENST00000576353 SAMD3Q8N6K7 520 aa27.22■■□□□ 1.95
SNF8-217ENST00000576353 SYTL5Q8TDW5 730 aaPredicted RBP27.22■■□□□ 1.95
SNF8-217ENST00000576353 TBC1D5Q92609 795 aa27.22■■□□□ 1.95
SNF8-217ENST00000576353 SENP6Q9GZR1 1112 aaPredicted RBP27.22■■□□□ 1.95
SNF8-217ENST00000576353 SEC63Q9UGP8 760 aaKnown RBP27.22■■□□□ 1.95
SNF8-217ENST00000576353 PLEKHA8P1O95397 391 aa27.21■■□□□ 1.95
SNF8-217ENST00000576353 PGK1P00558 417 aa27.21■■□□□ 1.95
SNF8-217ENST00000576353 RAB11FIP4Q86YS3 637 aa27.21■■□□□ 1.95
SNF8-217ENST00000576353 SRBD1Q8N5C6 995 aaKnown RBP27.21■■□□□ 1.95
SNF8-217ENST00000576353 ZBTB43O43298 467 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 CFBP00751 764 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 CPA1P15085 419 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 RPS6KB1P23443 525 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 TNFAIP2Q03169 654 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 PDE4DQ08499 809 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 IQSEC1Q6DN90 963 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 EEPD1Q7L9B9 569 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 NSUN6Q8TEA1 469 aaKnown RBP27.2■■□□□ 1.94
SNF8-217ENST00000576353 PIBF1Q8WXW3 757 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 SPC25Q9HBM1 224 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 RBM28Q9NW13 759 aaKnown RBP27.2■■□□□ 1.94
SNF8-217ENST00000576353 BRPF3Q9ULD4 1205 aa27.2■■□□□ 1.94
SNF8-217ENST00000576353 DDX49Q9Y6V7 483 aaKnown RBP27.2■■□□□ 1.94
SNF8-217ENST00000576353 CASTP20810 708 aaKnown RBP27.19■■□□□ 1.94
SNF8-217ENST00000576353 HSD17B4P51659 736 aa27.19■■□□□ 1.94
SNF8-217ENST00000576353 RCAN1P53805 252 aa27.19■■□□□ 1.94
SNF8-217ENST00000576353 GHRHRQ02643 423 aa27.19■■□□□ 1.94
SNF8-217ENST00000576353 Q6ZUG5 572 aa27.19■■□□□ 1.94
SNF8-217ENST00000576353 NOL8Q76FK4 1167 aaKnown RBP27.19■■□□□ 1.94
SNF8-217ENST00000576353 FBXL16Q8N461 479 aa27.19■■□□□ 1.94
SNF8-217ENST00000576353 LENG1Q96BZ8 264 aaPredicted RBP27.19■■□□□ 1.94
SNF8-217ENST00000576353 SYNRGQ9UMZ2 1314 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 KLF18A0A0U1RQI7 1052 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 OPLAHO14841 1288 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 ADAMTS4O75173 837 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 EDNRBP24530 442 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 ADCYAP1R1P41586 468 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 TAPT1Q6NXT6 567 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 TMTC3Q6ZXV5 915 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 FBXO16Q8IX29 292 aaPredicted RBP27.18■■□□□ 1.94
SNF8-217ENST00000576353 TAAR1Q96RJ0 339 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 RMDN3Q96TC7 470 aa27.18■■□□□ 1.94
SNF8-217ENST00000576353 RTN1Q16799 776 aa27.17■■□□□ 1.94
SNF8-217ENST00000576353 CMTR1Q8N1G2 835 aaKnown RBP27.17■■□□□ 1.94
SNF8-217ENST00000576353 IWS1Q96ST2 819 aa27.17■■□□□ 1.94
SNF8-217ENST00000576353 TSEN34Q9BSV6 310 aaKnown RBP27.17■■□□□ 1.94
SNF8-217ENST00000576353 PDGFCQ9NRA1 345 aa27.17■■□□□ 1.94
SNF8-217ENST00000576353 PHF24Q9UPV7 400 aa27.17■■□□□ 1.94
SNF8-217ENST00000576353 H0YGN5 161 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 GCOM1H8Y6P7 765 aaPredicted RBP27.16■■□□□ 1.94
SNF8-217ENST00000576353 ADCY6O43306 1168 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 POLR2MP0CAP2 368 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 GJA9P57773 515 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 PPP2R5BQ15173 497 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 ARHGEF16Q5VV41 709 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 CCDC82Q8N4S0 544 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 BRF1Q92994 677 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 TM6SF1Q9BZW5 370 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 UPF3AQ9H1J1 476 aaKnown RBP27.16■■□□□ 1.94
SNF8-217ENST00000576353 ZSWIM6Q9HCJ5 1215 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 COL20A1Q9P218 1284 aa27.16■■□□□ 1.94
SNF8-217ENST00000576353 NAP1L2Q9ULW6 460 aaPredicted RBP27.16■■□□□ 1.94
SNF8-217ENST00000576353 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.15■■□□□ 1.94
SNF8-217ENST00000576353 GOLGA8AA7E2F4 631 aa27.15■■□□□ 1.94
SNF8-217ENST00000576353 GOLGA8BA8MQT2 603 aa27.15■■□□□ 1.94
SNF8-217ENST00000576353 C6orf222P0C671 652 aaPredicted RBP27.15■■□□□ 1.94
SNF8-217ENST00000576353 RUFY3Q7L099 469 aa27.15■■□□□ 1.94
SNF8-217ENST00000576353 KLHDC9Q8NEP7 349 aa27.15■■□□□ 1.94
SNF8-217ENST00000576353 GNEQ9Y223 722 aaKnown RBP27.15■■□□□ 1.94
SNF8-217ENST00000576353 CYP46A1Q9Y6A2 500 aa27.15■■□□□ 1.94
SNF8-217ENST00000576353 FRMPD3Q5JV73 1810 aa27.15■■□□□ 1.94
SNF8-217ENST00000576353 CCDC196A0A1B0GTZ2 297 aa27.14■■□□□ 1.94
SNF8-217ENST00000576353 RBM47A0AV96 593 aaKnown RBP27.14■■□□□ 1.94
SNF8-217ENST00000576353 SMPD1P17405 629 aa27.14■■□□□ 1.94
SNF8-217ENST00000576353 CST5P28325 142 aaPredicted RBP27.14■■□□□ 1.94
SNF8-217ENST00000576353 APOBRQ0VD83 1088 aa27.14■■□□□ 1.94
SNF8-217ENST00000576353 LRRC26Q2I0M4 334 aa27.14■■□□□ 1.94
SNF8-217ENST00000576353 PCSK9Q8NBP7 692 aaKnown RBP27.14■■□□□ 1.94
SNF8-217ENST00000576353 AGXT2Q9BYV1 514 aa27.14■■□□□ 1.94
SNF8-217ENST00000576353 WDR11Q9BZH6 1224 aa27.14■■□□□ 1.94
SNF8-217ENST00000576353 AP5M1Q9H0R1 490 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms