RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 MNX1P50219 401 aaPredicted RBP17.68■□□□□ 0.42
SMG6-220ENST00000576218 TNFAIP2Q03169 654 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 ADCK5Q3MIX3 580 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 BLOC1S2Q6QNY1 142 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 FERMT2Q96AC1 680 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 MAP3K14Q99558 947 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 VTA1Q9NP79 307 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 DDX49Q9Y6V7 483 aaKnown RBP17.68■□□□□ 0.42
SMG6-220ENST00000576218 MYH6P13533 1939 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 SYNRGQ9UMZ2 1314 aa17.68■□□□□ 0.42
SMG6-220ENST00000576218 LOC102724159A0A0B4J2E5 919 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 PNMA6FA0A0J9YX94 578 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
SMG6-220ENST00000576218 PSMA5P28066 241 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 ADCYAP1R1P41586 468 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 PWP2Q15269 919 aaKnown RBP17.67■□□□□ 0.42
SMG6-220ENST00000576218 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 RGS22Q8NE09 1264 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 DNERQ8NFT8 737 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 RIOX1Q9H6W3 641 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 MCM3APO60318 1980 aa17.67■□□□□ 0.42
SMG6-220ENST00000576218 SMCHD1A6NHR9 2005 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 COL6A1P12109 1028 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 ARHGEF16Q5VV41 709 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 NSUN6Q8TEA1 469 aaKnown RBP17.66■□□□□ 0.42
SMG6-220ENST00000576218 VTI1AQ96AJ9 217 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 SPZ1Q9BXG8 430 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 MAF1Q9H063 256 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 ATP11BQ9Y2G3 1177 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 SNX14Q9Y5W7 946 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 ASTN1O14525 1302 aa17.66■□□□□ 0.42
SMG6-220ENST00000576218 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 ZBTB43O43298 467 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 CASTP20810 708 aaKnown RBP17.65■□□□□ 0.42
SMG6-220ENST00000576218 LRRC26Q2I0M4 334 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 TLK2Q86UE8 772 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 SGMS1Q86VZ5 419 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 FANCBQ8NB91 859 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 PCSK9Q8NBP7 692 aaKnown RBP17.65■□□□□ 0.42
SMG6-220ENST00000576218 SYTL5Q8TDW5 730 aaPredicted RBP17.65■□□□□ 0.42
SMG6-220ENST00000576218 MTMR8Q96EF0 704 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 RBM28Q9NW13 759 aaKnown RBP17.65■□□□□ 0.42
SMG6-220ENST00000576218 PRKAG2Q9UGJ0 569 aa17.65■□□□□ 0.42
SMG6-220ENST00000576218 ZMYND8Q9ULU4 1186 aaPredicted RBP17.65■□□□□ 0.42
SMG6-220ENST00000576218 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.64■□□□□ 0.41
SMG6-220ENST00000576218 GOLGA8AA7E2F4 631 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 GOLGA8BA8MQT2 603 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 GCOM1H8Y6P7 765 aaPredicted RBP17.64■□□□□ 0.41
SMG6-220ENST00000576218 CYTH3O43739 400 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 PPP1R11O60927 126 aaPredicted RBP17.64■□□□□ 0.41
SMG6-220ENST00000576218 POLR2MP0CAP2 368 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 EIF2AK2P19525 551 aaKnown RBP17.64■□□□□ 0.41
SMG6-220ENST00000576218 EXOSC10Q01780 885 aaKnown RBP17.64■□□□□ 0.41
SMG6-220ENST00000576218 COL9A3Q14050 684 aaPredicted RBP17.64■□□□□ 0.41
SMG6-220ENST00000576218 RTN1Q16799 776 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 GNASQ5JWF2 1037 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 IQSEC1Q6DN90 963 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 APOA5Q6Q788 366 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
SMG6-220ENST00000576218 TBC1D5Q92609 795 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 CUL5Q93034 780 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 PDGFCQ9NRA1 345 aa17.64■□□□□ 0.41
SMG6-220ENST00000576218 EPB41L2O43491 1005 aaKnown RBP17.63■□□□□ 0.41
SMG6-220ENST00000576218 ZEB2O60315 1214 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
SMG6-220ENST00000576218 ADAMTS4O75173 837 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 CPA1P15085 419 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 SYN1P17600 705 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 HOXA13P31271 388 aaPredicted RBP17.63■□□□□ 0.41
SMG6-220ENST00000576218 PPP2R5BQ15173 497 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 KCNA10Q16322 511 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 Q6ZUG5 572 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 MORC4Q8TE76 937 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 TAAR1Q96RJ0 339 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 TSEN34Q9BSV6 310 aaKnown RBP17.63■□□□□ 0.41
SMG6-220ENST00000576218 WDR11Q9BZH6 1224 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 KATNBL1Q9H079 304 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 STARD7Q9NQZ5 370 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
SMG6-220ENST00000576218 CEP290O15078 2479 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 A0A1W2PQ45 241 aaPredicted RBP17.62■□□□□ 0.41
SMG6-220ENST00000576218 A0A1W2PQY0 241 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 MOXD2PA6NHM9 499 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 DYNC1LI2O43237 492 aaPredicted RBP17.62■□□□□ 0.41
SMG6-220ENST00000576218 ADCY6O43306 1168 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 SMPD1P17405 629 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 SMARCA1P28370 1054 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 ACLYP53396 1101 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 GJA9P57773 515 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 RTP1P59025 263 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 STXBP2Q15833 593 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 SLC35G1Q2M3R5 365 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 BRDTQ58F21 947 aaPredicted RBP17.62■□□□□ 0.41
SMG6-220ENST00000576218 CHRDL2Q6WN34 429 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 SLC39A5Q6ZMH5 540 aa17.62■□□□□ 0.41
SMG6-220ENST00000576218 TMTC3Q6ZXV5 915 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms