RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	MRPL11	Q9Y3B7	192 aa	Known RBP	12.54	□□□□□ -0.4
SLC12A4-215	ENST00000575857	PCDHA1	Q9Y5I3	950 aa		12.54	□□□□□ -0.4
SLC12A4-215	ENST00000575857	ASTN1	O14525	1302 aa		12.54	□□□□□ -0.4
SLC12A4-215	ENST00000575857	SOWAHB	A6NEL2	793 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	GJB1	P08034	283 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	RPS6	P62753	249 aa	Known RBP	12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	CNTN2	Q02246	1040 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	ST3GAL1	Q11201	340 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	TRIM32	Q13049	653 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	BAAT	Q14032	418 aa	Predicted RBP	12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	NSMF	Q6X4W1	530 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	SLC30A10	Q6XR72	485 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	TRMT44	Q8IYL2	757 aa	Known RBP	12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	U2AF1L4	Q8WU68	220 aa	Known RBP	12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	DDX11	Q96FC9	970 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857		V9GY48	417 aa	Predicted RBP	12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	PFAS	O15067	1338 aa		12.53	□□□□□ -0.4
SLC12A4-215	ENST00000575857	POTEB2	H3BUK9	544 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PRPF3	O43395	683 aa	Known RBP	12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	HMGCR	P04035	888 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	INHA	P05111	366 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	TRAF1	Q13077	416 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	STK3	Q13188	491 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PKN1	Q16512	942 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	TYW1B	Q6NUM6	668 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	RNF207	Q6ZRF8	634 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PHKB	Q93100	1093 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PURB	Q96QR8	312 aa	Known RBP	12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	RNF26	Q9BY78	433 aa	Predicted RBP	12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SLK	Q9H2G2	1235 aa	Predicted RBP	12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SLC5A4	Q9NY91	659 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	COL20A1	Q9P218	1284 aa		12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SEC63	Q9UGP8	760 aa	Known RBP	12.52	□□□□□ -0.41
SLC12A4-215	ENST00000575857	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	FARP2	O94887	1054 aa	Predicted RBP	12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CD2BP2	O95400	341 aa	Known RBP	12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CTDNEP1	O95476	244 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CYP2C19	P33261	490 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	HSD17B4	P51659	736 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PFKFB3	Q16875	520 aa	Predicted RBP	12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	WWC2	Q6AWC2	1192 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MAMDC4	Q6UXC1	1216 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	NOL8	Q76FK4	1167 aa	Known RBP	12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MCF2L2	Q86YR7	1114 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MSL3	Q8N5Y2	521 aa	Known RBP	12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	NECAB1	Q8N987	351 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	IL27	Q8NEV9	243 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MORC4	Q8TE76	937 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	GTF3C6	Q969F1	213 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	TINF2	Q9BSI4	451 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PRO3102	Q9H379	93 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	LIMCH1	Q9UPQ0	1083 aa		12.51	□□□□□ -0.41
SLC12A4-215	ENST00000575857	LCT	P09848	1927 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PTPDC1	A2A3K4	754 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	STXBP3	O00186	592 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PPFIA3	O75145	1194 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	UBXN2A	P68543	259 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CACNB2	Q08289	660 aa	Predicted RBP	12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SAMD3	Q8N6K7	520 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	TRPV1	Q8NER1	839 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	DIS3L	Q8TF46	1054 aa	Known RBP	12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	DEFB118	Q96PH6	123 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	BARHL2	Q9NY43	387 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MAP3K20	Q9NYL2	800 aa	Known RBP	12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	TRIOBP	Q9H2D6	2365 aa		12.5	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MYH6	P13533	1939 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SYNGAP1	Q96PV0	1343 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	LOC102724159	A0A0B4J2E5	919 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	hCG_1984214	I3L0E3	225 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SOX1	O00570	391 aa	Predicted RBP	12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MEIS2	O14770	477 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SGPL1	O95470	568 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SNAI1	O95863	264 aa	Predicted RBP	12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CFB	P00751	764 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CYBA	P13498	195 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SCG2	P13521	617 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PRKAR2A	P13861	404 aa	Known RBP	12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	EDNRB	P24530	442 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CALML3	P27482	149 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PWP2	Q15269	919 aa	Known RBP	12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	MFSD14C	Q5VZR4	134 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PPP1R18	Q6NYC8	613 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	HEATR3	Q7Z4Q2	680 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	ZNF713	Q8N859	430 aa	Predicted RBP	12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	SLC26A6	Q9BXS9	759 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	KATNBL1	Q9H079	304 aa		12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	DDX49	Q9Y6V7	483 aa	Known RBP	12.49	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PLXNA1	Q9UIW2	1896 aa		12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	RPTOR	Q8N122	1335 aa		12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	STK36	Q9NRP7	1315 aa		12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	PIK3CD	O00329	1044 aa		12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	CPLX1	O14810	134 aa		12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	ST18	O60284	1047 aa		12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	DTNB	O60941	627 aa		12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	TFRC	P02786	760 aa	Known RBP	12.48	□□□□□ -0.41
SLC12A4-215	ENST00000575857	POLR2M	P0CAP2	368 aa		12.48	□□□□□ -0.41

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