RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	USP26	Q9BXU7	913 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	KATNBL1	Q9H079	304 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	XPNPEP3	Q9NQH7	507 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	PCDHA1	Q9Y5I3	950 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	KBTBD13	C9JR72	458 aa		29.34	■■■□□ 2.29
SRRM2-223	ENST00000575701	APOA5	Q6Q788	366 aa		29.34	■■■□□ 2.29
SRRM2-223	ENST00000575701	FANCB	Q8NB91	859 aa		29.34	■■■□□ 2.29
SRRM2-223	ENST00000575701	TCEANC2	Q96MN5	208 aa		29.34	■■■□□ 2.29
SRRM2-223	ENST00000575701	MAP3K20	Q9NYL2	800 aa	Known RBP	29.34	■■■□□ 2.29
SRRM2-223	ENST00000575701	PPP1R11	O60927	126 aa	Predicted RBP	29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	RCAN1	P53805	252 aa		29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	FGD1	P98174	961 aa		29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	GHRHR	Q02643	423 aa		29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	CCDC144B	Q3MJ40	725 aa		29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	MICU3	Q86XE3	530 aa		29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	DPF3	Q92784	378 aa		29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	RRP36	Q96EU6	259 aa	Known RBP	29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	VTA1	Q9NP79	307 aa		29.33	■■■□□ 2.29
SRRM2-223	ENST00000575701	DUSP11	O75319	330 aa	Known RBP	29.32	■■■□□ 2.28
SRRM2-223	ENST00000575701	RNF180	Q86T96	592 aa		29.32	■■■□□ 2.28
SRRM2-223	ENST00000575701	FBXL16	Q8N461	479 aa		29.32	■■■□□ 2.28
SRRM2-223	ENST00000575701	PURB	Q96QR8	312 aa	Known RBP	29.32	■■■□□ 2.28
SRRM2-223	ENST00000575701	RBM28	Q9NW13	759 aa	Known RBP	29.32	■■■□□ 2.28
SRRM2-223	ENST00000575701	SEC63	Q9UGP8	760 aa	Known RBP	29.32	■■■□□ 2.28
SRRM2-223	ENST00000575701	RXRA	P19793	462 aa		29.31	■■■□□ 2.28
SRRM2-223	ENST00000575701	LRRC41	Q15345	812 aa		29.31	■■■□□ 2.28
SRRM2-223	ENST00000575701	ZBTB43	O43298	467 aa		29.3	■■■□□ 2.28
SRRM2-223	ENST00000575701	PLEKHA8P1	O95397	391 aa		29.3	■■■□□ 2.28
SRRM2-223	ENST00000575701	RPS6KB1	P23443	525 aa		29.3	■■■□□ 2.28
SRRM2-223	ENST00000575701	GJC2	Q5T442	439 aa	Predicted RBP	29.3	■■■□□ 2.28
SRRM2-223	ENST00000575701	TMTC3	Q6ZXV5	915 aa		29.3	■■■□□ 2.28
SRRM2-223	ENST00000575701	SYTL5	Q8TDW5	730 aa	Predicted RBP	29.3	■■■□□ 2.28
SRRM2-223	ENST00000575701	CAST	P20810	708 aa	Known RBP	29.29	■■■□□ 2.28
SRRM2-223	ENST00000575701	EDNRB	P24530	442 aa		29.29	■■■□□ 2.28
SRRM2-223	ENST00000575701	HSD17B4	P51659	736 aa		29.29	■■■□□ 2.28
SRRM2-223	ENST00000575701	PDE4D	Q08499	809 aa		29.29	■■■□□ 2.28
SRRM2-223	ENST00000575701	SRBD1	Q8N5C6	995 aa	Known RBP	29.29	■■■□□ 2.28
SRRM2-223	ENST00000575701	SPC25	Q9HBM1	224 aa		29.29	■■■□□ 2.28
SRRM2-223	ENST00000575701	NR2E3	Q9Y5X4	410 aa		29.29	■■■□□ 2.28
SRRM2-223	ENST00000575701	SYNRG	Q9UMZ2	1314 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	KLF18	A0A0U1RQI7	1052 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	OPLAH	O14841	1288 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	EVI5	O60447	810 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	ADAMTS4	O75173	837 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	CFB	P00751	764 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	PPP2R5B	Q15173	497 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	IQSEC1	Q6DN90	963 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701		Q6ZUG5	572 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	NSUN6	Q8TEA1	469 aa	Known RBP	29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	TBC1D5	Q92609	795 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	TM6SF1	Q9BZW5	370 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	BRPF3	Q9ULD4	1205 aa		29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	BAZ2B	Q9UIF8	2168 aa	Known RBP	29.28	■■■□□ 2.28
SRRM2-223	ENST00000575701	PGK1	P00558	417 aa		29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	MYCN	P04198	464 aa	Predicted RBP	29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	CPA1	P15085	419 aa		29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	TNFAIP2	Q03169	654 aa		29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	RTN1	Q16799	776 aa		29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	RAB11FIP4	Q86YS3	637 aa		29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	FBXO16	Q8IX29	292 aa	Predicted RBP	29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	LENG1	Q96BZ8	264 aa	Predicted RBP	29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	AGXT2	Q9BYV1	514 aa		29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	SENP6	Q9GZR1	1112 aa	Predicted RBP	29.27	■■■□□ 2.28
SRRM2-223	ENST00000575701	ALPK3	Q96L96	1907 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	TAPT1	Q6NXT6	567 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	RUFY3	Q7L099	469 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	EEPD1	Q7L9B9	569 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	PIBF1	Q8WXW3	757 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	IWS1	Q96ST2	819 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	RMDN3	Q96TC7	470 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	TSEN34	Q9BSV6	310 aa	Known RBP	29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	UPF3A	Q9H1J1	476 aa	Known RBP	29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	ZSWIM6	Q9HCJ5	1215 aa		29.26	■■■□□ 2.27
SRRM2-223	ENST00000575701	GOLGA8A	A7E2F4	631 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	GOLGA8B	A8MQT2	603 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	ADCY6	O43306	1168 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	CST5	P28325	142 aa	Predicted RBP	29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	ADCYAP1R1	P41586	468 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	GJA9	P57773	515 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	BRF1	Q92994	677 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	TAAR1	Q96RJ0	339 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	COL20A1	Q9P218	1284 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	PHF24	Q9UPV7	400 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701		Q9Y3F1	56 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	CYP46A1	Q9Y6A2	500 aa		29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	DDX49	Q9Y6V7	483 aa	Known RBP	29.25	■■■□□ 2.27
SRRM2-223	ENST00000575701	GCOM1	H8Y6P7	765 aa	Predicted RBP	29.24	■■■□□ 2.27
SRRM2-223	ENST00000575701	POLR2M	P0CAP2	368 aa		29.24	■■■□□ 2.27
SRRM2-223	ENST00000575701	NID2	Q14112	1375 aa		29.24	■■■□□ 2.27
SRRM2-223	ENST00000575701	CCDC196	A0A1B0GTZ2	297 aa		29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	RBM47	A0AV96	593 aa	Known RBP	29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	MOXD2P	A6NHM9	499 aa		29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	NKX3-2	P78367	333 aa		29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	ARHGEF16	Q5VV41	709 aa		29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	NOL8	Q76FK4	1167 aa	Known RBP	29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	CMTR1	Q8N1G2	835 aa	Known RBP	29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	KLHDC9	Q8NEP7	349 aa		29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	GNE	Q9Y223	722 aa	Known RBP	29.23	■■■□□ 2.27
SRRM2-223	ENST00000575701	CNTNAP5	Q8WYK1	1306 aa		29.22	■■■□□ 2.27
SRRM2-223	ENST00000575701	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	29.22	■■■□□ 2.27

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms