RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SUPT20HL2P0C7V6 817 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 CYP2C9P11712 490 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 SLC1A4P43007 532 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 PURAQ00577 322 aaKnown RBP11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 PDE4BQ07343 736 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 PHOSPHO2Q8TCD6 241 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 PRR12Q9ULL5 1215 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 TCF20Q9UGU0 1960 aaKnown RBP11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 TNKSO95271 1327 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 RBM47A0AV96 593 aaKnown RBP11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 EPOPA6NHQ4 379 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 TLL1O43897 1013 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 SNAP25P60880 206 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 TAP1Q03518 808 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 KCTD1Q719H9 257 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 CHMP4BQ9H444 224 aaKnown RBP11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 EPHX3Q9H6B9 360 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 IL17RBQ9NRM6 502 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 COG5Q9UP83 839 aa11.84□□□□□ -0.51
CALCOCO2-227ENST00000575560 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 ARHGEF15O94989 841 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 RFC2P35250 354 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 NOVP48745 357 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 CPT1AP50416 773 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 PPARAQ07869 468 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 SKIV2LQ15477 1246 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 KRT40Q6A162 431 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 DEFB128Q7Z7B8 93 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 SLC9A7Q96T83 725 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 LRFN3Q9BTN0 628 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 WDR11Q9BZH6 1224 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 NACAP1Q9BZK3 213 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 CERS4Q9HA82 394 aa11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 ISY1Q9ULR0 285 aaKnown RBP11.83□□□□□ -0.52
CALCOCO2-227ENST00000575560 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 ICAM1P05362 532 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 ACTN1P12814 892 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 ALDH5A1P51649 535 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 BAATQ14032 418 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 TSHZ3Q63HK5 1081 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 NFRKBQ6P4R8 1299 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 NSMFQ6X4W1 530 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 HERC6Q8IVU3 1022 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 RANBP17Q9H2T7 1088 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 ADD3Q9UEY8 706 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 CCPG1Q9ULG6 757 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 LRRC37A2A6NM11 1700 aa11.82□□□□□ -0.52
CALCOCO2-227ENST00000575560 A6NJR5 290 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 FOXP2O15409 715 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 NMT2O60551 498 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 LPXNO60711 386 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 MYL3P08590 195 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 BTNL9Q6UXG8 535 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 RASGRP2Q7LDG7 609 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 ARNTL2Q8WYA1 636 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 HLA-CQ95604 372 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 NAPBQ9H115 298 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 INCENPQ9NQS7 918 aa11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO2-227ENST00000575560 KIF28PB7ZC32 967 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 NFIBO00712 420 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 KPNA6O60684 536 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 GPR37L1O60883 481 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 GRB10Q13322 594 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 LRRFIP1Q32MZ4 808 aaKnown RBP11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 TTBK2Q6IQ55 1244 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 RETREG2Q8NC44 543 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 OR6J1Q8NGC5 347 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 DCAF4Q8WV16 495 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 CLEC4DQ8WXI8 215 aa11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 KHSRPQ92945 711 aaKnown RBP eCLIP11.8□□□□□ -0.52
CALCOCO2-227ENST00000575560 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 TSPY2A6NKD2 308 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 NKRFO15226 690 aaKnown RBP eCLIP11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 BAIAP3O94812 1187 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 EDNRBP24530 442 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 SLC16A2P36021 539 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 BFSP2Q13515 415 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 GPNMBQ14956 572 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 BRDTQ58F21 947 aaPredicted RBP11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 FAM47CQ5HY64 1035 aa11.79□□□□□ -0.52
CALCOCO2-227ENST00000575560 TMEM31Q5JXX7 168 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms