RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 LTBP2Q14767 1821 aa13.96□□□□□ -0.17
USP43-206ENST00000575346 MYH6P13533 1939 aa13.96□□□□□ -0.18
USP43-206ENST00000575346 ASGR1P07306 291 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 C6orf222P0C671 652 aaPredicted RBP13.95□□□□□ -0.18
USP43-206ENST00000575346 SMPD1P17405 629 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 CALML3P27482 149 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 USH1GQ495M9 461 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 ANKRD33Q7Z3H0 272 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 FBXO11Q86XK2 927 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 MCF2L2Q86YR7 1114 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 FBXO16Q8IX29 292 aaPredicted RBP13.95□□□□□ -0.18
USP43-206ENST00000575346 LRCH3Q96II8 777 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 MPHOSPH6Q99547 160 aaKnown RBP13.95□□□□□ -0.18
USP43-206ENST00000575346 SENP2Q9HC62 589 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 STARD7Q9NQZ5 370 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 PDGFCQ9NRA1 345 aa13.95□□□□□ -0.18
USP43-206ENST00000575346 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
USP43-206ENST00000575346 DDX49Q9Y6V7 483 aaKnown RBP13.95□□□□□ -0.18
USP43-206ENST00000575346 B4DLN1 442 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 SLC27A2O14975 620 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 ZBTB5O15062 677 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 CDK7P50613 346 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
USP43-206ENST00000575346 IRX5P78411 483 aaPredicted RBP13.94□□□□□ -0.18
USP43-206ENST00000575346 TLE2Q04725 743 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 DUSP28Q4G0W2 176 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 TMEM67Q5HYA8 995 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 GNASQ5JWF2 1037 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 TLK2Q86UE8 772 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 TDHQ8IZJ6 230 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 SAMD3Q8N6K7 520 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 SLC17A8Q8NDX2 589 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 TMEM87BQ96K49 555 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 GLT1D1Q96MS3 346 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 AMNQ9BXJ7 453 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 MAP3K20Q9NYL2 800 aaKnown RBP13.94□□□□□ -0.18
USP43-206ENST00000575346 PRKAG2Q9UGJ0 569 aa13.94□□□□□ -0.18
USP43-206ENST00000575346 CYTH3O43739 400 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 DHX16O60231 1041 aaKnown RBP13.93□□□□□ -0.18
USP43-206ENST00000575346 CABYRO75952 493 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 MCM5P33992 734 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 MDM2Q00987 491 aaPredicted RBP13.93□□□□□ -0.18
USP43-206ENST00000575346 SLC35G1Q2M3R5 365 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 LRIT3Q3SXY7 679 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 CREB3L3Q68CJ9 461 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 CHST3Q7LGC8 479 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 TMTC2Q8N394 836 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 SYTL5Q8TDW5 730 aaPredicted RBP13.93□□□□□ -0.18
USP43-206ENST00000575346 TBC1D5Q92609 795 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 CCDC136Q96JN2 1154 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 LBHD1Q9BQE6 289 aaPredicted RBP13.93□□□□□ -0.18
USP43-206ENST00000575346 UBE2OQ9C0C9 1292 aaKnown RBP13.93□□□□□ -0.18
USP43-206ENST00000575346 LY9Q9HBG7 655 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 VAT1LQ9HCJ6 419 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 LAMA3Q16787 3333 aa13.93□□□□□ -0.18
USP43-206ENST00000575346 MROH7Q68CQ1 1323 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 TRIM43BA6NCK2 446 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 OPLAHO14841 1288 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 KIAA0355O15063 1070 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
USP43-206ENST00000575346 DYNC1LI2O43237 492 aaPredicted RBP13.92□□□□□ -0.18
USP43-206ENST00000575346 PPP1R11O60927 126 aaPredicted RBP13.92□□□□□ -0.18
USP43-206ENST00000575346 CDC45O75419 566 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 DDAH1O94760 285 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 CLTBP09497 229 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 SMARCA1P28370 1054 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 LIFRP42702 1097 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 HSD17B4P51659 736 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 TRAF1Q13077 416 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 FSCN1Q16658 493 aaKnown RBP13.92□□□□□ -0.18
USP43-206ENST00000575346 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 TMEM63BQ5T3F8 832 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 CASC1Q6TDU7 716 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 TRIM43Q96BQ3 446 aaPredicted RBP13.92□□□□□ -0.18
USP43-206ENST00000575346 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 SEZ6LQ9BYH1 1024 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 WDR11Q9BZH6 1224 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 COL20A1Q9P218 1284 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 DNAH12Q6ZR08 3092 aa13.92□□□□□ -0.18
USP43-206ENST00000575346 A0A0U1RQG5 324 aaPredicted RBP13.91□□□□□ -0.18
USP43-206ENST00000575346 ARVCFO00192 962 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 DLL1O00548 723 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 SH2B2O14492 632 aaPredicted RBP13.91□□□□□ -0.18
USP43-206ENST00000575346 PRC1O43663 620 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 ZEB2O60315 1214 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 BEX3Q00994 111 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 PDE4DQ08499 809 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 FAAP100Q0VG06 881 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 RNF20Q5VTR2 975 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 GPR153Q6NV75 609 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 NOL8Q76FK4 1167 aaKnown RBP13.91□□□□□ -0.18
USP43-206ENST00000575346 SH3RF1Q7Z6J0 888 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 SLC43A3Q8NBI5 491 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms