RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 ZNF365Q70YC5 407 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 PURBQ96QR8 312 aaKnown RBP12.3□□□□□ -0.44
TVP23B-208ENST00000575261 CRBNQ96SW2 442 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
TVP23B-208ENST00000575261 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 TCP11L1Q9NUJ3 509 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 GRXCR1A8MXD5 290 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 PBX2P40425 430 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 CPT1AP50416 773 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 RAB30Q15771 203 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 DUSP28Q4G0W2 176 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 SLC30A10Q6XR72 485 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 ZNF589Q86UQ0 364 aaPredicted RBP12.29□□□□□ -0.44
TVP23B-208ENST00000575261 HERVK_113Q902F9 699 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
TVP23B-208ENST00000575261 MPHOSPH6Q99547 160 aaKnown RBP12.29□□□□□ -0.44
TVP23B-208ENST00000575261 NOC4LQ9BVI4 516 aaKnown RBP12.29□□□□□ -0.44
TVP23B-208ENST00000575261 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 REV3LO60673 3130 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 GRIN2DO15399 1336 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 UMODL1Q5DID0 1318 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 GBF1Q92538 1859 aa12.29□□□□□ -0.44
TVP23B-208ENST00000575261 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 CALML3P27482 149 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
TVP23B-208ENST00000575261 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
TVP23B-208ENST00000575261 CCL23P55773 120 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 HAND2P61296 217 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 PSMC6P62333 389 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 NMIQ13287 307 aaPredicted RBP12.28□□□□□ -0.44
TVP23B-208ENST00000575261 AKNAD1Q5T1N1 836 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 TMEM63BQ5T3F8 832 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 MFSD6Q6ZSS7 791 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 USP38Q8NB14 1042 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 TTC14Q96N46 770 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 TRPV6Q9H1D0 765 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 WNT8AQ9H1J5 351 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 ALDH8A1Q9H2A2 487 aaPredicted RBP12.28□□□□□ -0.44
TVP23B-208ENST00000575261 RNF41Q9H4P4 317 aaPredicted RBP12.28□□□□□ -0.44
TVP23B-208ENST00000575261 MSRAQ9UJ68 235 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 WDR19Q8NEZ3 1342 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 RAD50Q92878 1312 aa12.28□□□□□ -0.44
TVP23B-208ENST00000575261 FGBP02675 491 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 SUPT20HL2P0C7V6 817 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 SNHG28P0DPA3 235 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 BRDTQ58F21 947 aaPredicted RBP12.27□□□□□ -0.45
TVP23B-208ENST00000575261 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
TVP23B-208ENST00000575261 RNF207Q6ZRF8 634 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 OTOP2Q7RTS6 562 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 RPUSD2Q8IZ73 545 aaKnown RBP12.27□□□□□ -0.45
TVP23B-208ENST00000575261 OR6J1Q8NGC5 347 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 ESR2Q92731 530 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
TVP23B-208ENST00000575261 CXXC1Q9P0U4 656 aaPredicted RBP12.27□□□□□ -0.45
TVP23B-208ENST00000575261 TANC1Q9C0D5 1861 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 SCN10AQ9Y5Y9 1956 aa12.27□□□□□ -0.45
TVP23B-208ENST00000575261 RBM47A0AV96 593 aaKnown RBP12.26□□□□□ -0.45
TVP23B-208ENST00000575261 B4DLN1 442 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
TVP23B-208ENST00000575261 PFKMP08237 780 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 MYL3P08590 195 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 EDNRBP24530 442 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 NT5C2P49902 561 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
TVP23B-208ENST00000575261 RPS6P62753 249 aaKnown RBP12.26□□□□□ -0.45
TVP23B-208ENST00000575261 PURAQ00577 322 aaKnown RBP12.26□□□□□ -0.45
TVP23B-208ENST00000575261 PDE4DQ08499 809 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 TJAP1Q5JTD0 557 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 TBC1D10CQ8IV04 446 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 DNERQ8NFT8 737 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 SCFD2Q8WU76 684 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 MTG1Q9BT17 334 aaPredicted RBP12.26□□□□□ -0.45
TVP23B-208ENST00000575261 PRDM12Q9H4Q4 367 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 TNKSO95271 1327 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 NEDD4P46934 1319 aa12.26□□□□□ -0.45
TVP23B-208ENST00000575261 AAMPQ13685 434 aa12.25□□□□□ -0.45
TVP23B-208ENST00000575261 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
TVP23B-208ENST00000575261 SCLYQ96I15 445 aa12.25□□□□□ -0.45
TVP23B-208ENST00000575261 NKX2-4Q9H2Z4 354 aa12.25□□□□□ -0.45
TVP23B-208ENST00000575261 SLC28A3Q9HAS3 691 aa12.25□□□□□ -0.45
TVP23B-208ENST00000575261 TRMT13Q9NUP7 481 aaKnown RBP12.25□□□□□ -0.45
TVP23B-208ENST00000575261 SLC4A7Q9Y6M7 1214 aa12.25□□□□□ -0.45
TVP23B-208ENST00000575261 MYO9BQ13459 2157 aa12.25□□□□□ -0.45
TVP23B-208ENST00000575261 ZBBXA8MT70 800 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 ZNF213O14771 459 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 KPNA6O60684 536 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 CYP2C9P11712 490 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 SDSP20132 328 aa12.24□□□□□ -0.45
TVP23B-208ENST00000575261 USH1GQ495M9 461 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms