RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 ADD3Q9UEY8 706 aaKnown RBP19.74■□□□□ 0.75
TVP23A-209ENST00000575135 TRANK1O15050 2925 aa19.74■□□□□ 0.75
TVP23A-209ENST00000575135 ALDH5A1P51649 535 aaPredicted RBP19.73■□□□□ 0.75
TVP23A-209ENST00000575135 DUSP28Q4G0W2 176 aa19.73■□□□□ 0.75
TVP23A-209ENST00000575135 MCMDC2Q4G0Z9 681 aa19.73■□□□□ 0.75
TVP23A-209ENST00000575135 OTOP2Q7RTS6 562 aa19.73■□□□□ 0.75
TVP23A-209ENST00000575135 GAS2L1Q99501 681 aaPredicted RBP19.73■□□□□ 0.75
TVP23A-209ENST00000575135 WNT8AQ9H1J5 351 aa19.73■□□□□ 0.75
TVP23A-209ENST00000575135 PRDM12Q9H4Q4 367 aa19.73■□□□□ 0.75
TVP23A-209ENST00000575135 TCP11L1Q9NUJ3 509 aa19.73■□□□□ 0.75
TVP23A-209ENST00000575135 PTPDC1A2A3K4 754 aa19.72■□□□□ 0.75
TVP23A-209ENST00000575135 HSPD1P10809 573 aaKnown RBP19.72■□□□□ 0.75
TVP23A-209ENST00000575135 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
TVP23A-209ENST00000575135 PPM1EQ8WY54 764 aa19.72■□□□□ 0.75
TVP23A-209ENST00000575135 SYMPKQ92797 1274 aaKnown RBP19.72■□□□□ 0.75
TVP23A-209ENST00000575135 WDR11Q9BZH6 1224 aa19.72■□□□□ 0.75
TVP23A-209ENST00000575135 PRDM6Q9NQX0 595 aa19.72■□□□□ 0.75
TVP23A-209ENST00000575135 MSRAQ9UJ68 235 aa19.72■□□□□ 0.75
TVP23A-209ENST00000575135 GBF1Q92538 1859 aa19.71■□□□□ 0.75
TVP23A-209ENST00000575135 HAND2P61296 217 aa19.71■□□□□ 0.75
TVP23A-209ENST00000575135 RAB30Q15771 203 aa19.71■□□□□ 0.75
TVP23A-209ENST00000575135 SLC30A10Q6XR72 485 aa19.71■□□□□ 0.75
TVP23A-209ENST00000575135 ZNF589Q86UQ0 364 aaPredicted RBP19.71■□□□□ 0.75
TVP23A-209ENST00000575135 CLEC4DQ8WXI8 215 aa19.71■□□□□ 0.75
TVP23A-209ENST00000575135 CRBNQ96SW2 442 aa19.71■□□□□ 0.75
TVP23A-209ENST00000575135 ALDH8A1Q9H2A2 487 aaPredicted RBP19.71■□□□□ 0.75
TVP23A-209ENST00000575135 MTIF3Q9H2K0 278 aaKnown RBP19.71■□□□□ 0.75
TVP23A-209ENST00000575135 LOC102724159A0A0B4J2E5 919 aa19.7■□□□□ 0.74
TVP23A-209ENST00000575135 RBM47A0AV96 593 aaKnown RBP19.7■□□□□ 0.74
TVP23A-209ENST00000575135 PDHBP11177 359 aa19.7■□□□□ 0.74
TVP23A-209ENST00000575135 CALML3P27482 149 aa19.7■□□□□ 0.74
TVP23A-209ENST00000575135 NMIQ13287 307 aaPredicted RBP19.7■□□□□ 0.74
TVP23A-209ENST00000575135 PWP2Q15269 919 aaKnown RBP19.7■□□□□ 0.74
TVP23A-209ENST00000575135 VWCEQ96DN2 955 aa19.7■□□□□ 0.74
TVP23A-209ENST00000575135 SCLYQ96I15 445 aa19.7■□□□□ 0.74
TVP23A-209ENST00000575135 NKX2-4Q9H2Z4 354 aa19.7■□□□□ 0.74
TVP23A-209ENST00000575135 TRMT13Q9NUP7 481 aaKnown RBP19.7■□□□□ 0.74
TVP23A-209ENST00000575135 POLR3EQ9NVU0 708 aa19.7■□□□□ 0.74
TVP23A-209ENST00000575135 YBX2Q9Y2T7 364 aaKnown RBP19.7■□□□□ 0.74
TVP23A-209ENST00000575135 MYL3P08590 195 aa19.69■□□□□ 0.74
TVP23A-209ENST00000575135 ZNF543Q08ER8 600 aa19.69■□□□□ 0.74
TVP23A-209ENST00000575135 ADGRE1Q14246 886 aa19.69■□□□□ 0.74
TVP23A-209ENST00000575135 TJAP1Q5JTD0 557 aa19.69■□□□□ 0.74
TVP23A-209ENST00000575135 RNF207Q6ZRF8 634 aa19.69■□□□□ 0.74
TVP23A-209ENST00000575135 RPUSD2Q8IZ73 545 aaKnown RBP19.69■□□□□ 0.74
TVP23A-209ENST00000575135 ZMYM6O95789 1325 aa19.69■□□□□ 0.74
TVP23A-209ENST00000575135 CYP2C9P11712 490 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 CPT1AP50416 773 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 RABGGTBP53611 331 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 PURAQ00577 322 aaKnown RBP19.68■□□□□ 0.74
TVP23A-209ENST00000575135 HDAC1Q13547 482 aaPredicted RBP19.68■□□□□ 0.74
TVP23A-209ENST00000575135 AKNAD1Q5T1N1 836 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 MFSD6Q6ZSS7 791 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 TICAM2Q86XR7 235 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 OR6J1Q8NGC5 347 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 TTC14Q96N46 770 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 MTG1Q9BT17 334 aaPredicted RBP19.68■□□□□ 0.74
TVP23A-209ENST00000575135 SLC28A3Q9HAS3 691 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 SLC4A7Q9Y6M7 1214 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 BDP1A6H8Y1 2624 aa19.68■□□□□ 0.74
TVP23A-209ENST00000575135 TRIM6-TRIM34B2RNG4 842 aa19.67■□□□□ 0.74
TVP23A-209ENST00000575135 SNHG28P0DPA3 235 aa19.67■□□□□ 0.74
TVP23A-209ENST00000575135 RPS6P62753 249 aaKnown RBP19.67■□□□□ 0.74
TVP23A-209ENST00000575135 PDE4DQ08499 809 aa19.67■□□□□ 0.74
TVP23A-209ENST00000575135 CCDC85BQ15834 202 aaPredicted RBP19.67■□□□□ 0.74
TVP23A-209ENST00000575135 TBC1D10CQ8IV04 446 aa19.67■□□□□ 0.74
TVP23A-209ENST00000575135 PNMA2Q9UL42 364 aa19.67■□□□□ 0.74
TVP23A-209ENST00000575135 TNKSO95271 1327 aa19.67■□□□□ 0.74
TVP23A-209ENST00000575135 CCDC171Q6TFL3 1326 aa19.67■□□□□ 0.74
TVP23A-209ENST00000575135 XIRP2A4UGR9 3374 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 ZBBXA8MT70 800 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 SUPT20HL2P0C7V6 817 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 MYOGP15173 224 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 IGFBP4P22692 258 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 PPP1R13LQ8WUF5 828 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 COPS5Q92905 334 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 RILPL2Q969X0 211 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 LNPKQ9C0E8 428 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 GPHNQ9NQX3 736 aaPredicted RBP19.66■□□□□ 0.74
TVP23A-209ENST00000575135 WDR19Q8NEZ3 1342 aa19.66■□□□□ 0.74
TVP23A-209ENST00000575135 SCN10AQ9Y5Y9 1956 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 SCN5AQ14524 2016 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 GOLGA8HP0CJ92 632 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 PCP11498 1178 aaKnown RBP19.65■□□□□ 0.74
TVP23A-209ENST00000575135 EDNRBP24530 442 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 TTLL4Q14679 1199 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 PPP2R5BQ15173 497 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 NBPF20Q3BBV1 942 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 BRDTQ58F21 947 aaPredicted RBP19.65■□□□□ 0.74
TVP23A-209ENST00000575135 FAM47CQ5HY64 1035 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 SCFD2Q8WU76 684 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 MPHOSPH6Q99547 160 aaKnown RBP19.65■□□□□ 0.74
TVP23A-209ENST00000575135 ZKSCAN3Q9BRR0 538 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 CPVLQ9H3G5 476 aa19.65■□□□□ 0.74
TVP23A-209ENST00000575135 NKRFO15226 690 aaKnown RBP eCLIP19.64■□□□□ 0.73
TVP23A-209ENST00000575135 USH1GQ495M9 461 aa19.64■□□□□ 0.73
TVP23A-209ENST00000575135 DEFB128Q7Z7B8 93 aa19.64■□□□□ 0.73
TVP23A-209ENST00000575135 DNERQ8NFT8 737 aa19.64■□□□□ 0.73
TVP23A-209ENST00000575135 ATXN2LQ8WWM7 1075 aaKnown RBP19.64■□□□□ 0.73
TVP23A-209ENST00000575135 UBA5Q9GZZ9 404 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms