RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	GPRC5A	Q8NFJ5	357 aa		13.6	□□□□□ -0.23
PRPF8-212	ENST00000575116	CAPNS2	Q96L46	248 aa		13.6	□□□□□ -0.23
PRPF8-212	ENST00000575116	PAGR1	Q9BTK6	254 aa		13.6	□□□□□ -0.23
PRPF8-212	ENST00000575116	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.6	□□□□□ -0.23
PRPF8-212	ENST00000575116	MROH8	Q9H579	483 aa		13.6	□□□□□ -0.23
PRPF8-212	ENST00000575116	RIPK3	Q9Y572	518 aa		13.6	□□□□□ -0.23
PRPF8-212	ENST00000575116	SMCHD1	A6NHR9	2005 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	MYH15	Q9Y2K3	1946 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	SPDYE3	A6NKU9	549 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	NFIB	O00712	420 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	MAP2K2	P36507	400 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	USP11	P51784	963 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	TAF1C	Q15572	869 aa	Predicted RBP	13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	UBE2S	Q16763	222 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	FAM110C	Q1W6H9	321 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116		Q3C1V9	767 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	EARS2	Q5JPH6	523 aa	Known RBP	13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	FAM173B	Q6P4H8	233 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	RASGRP4	Q8TDF6	673 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	TBC1D5	Q92609	795 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	NAP1L4	Q99733	375 aa	Known RBP	13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	EHMT1	Q9H9B1	1298 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	ZFYVE28	Q9HCC9	887 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	TXNRD2	Q9NNW7	524 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	POLR3E	Q9NVU0	708 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	TMEM260	Q9NX78	707 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	RTEL1	Q9NZ71	1219 aa		13.59	□□□□□ -0.23
PRPF8-212	ENST00000575116	BMP15	O95972	392 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	TAL1	P17542	331 aa	Predicted RBP	13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	NASP	P49321	788 aa	Predicted RBP	13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	TOB1	P50616	345 aa	Predicted RBP	13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	ORC2	Q13416	577 aa	Predicted RBP	13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	CSPP1	Q1MSJ5	1256 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	RNF207	Q6ZRF8	634 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	TBCK	Q8TEA7	893 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	ANO3	Q9BYT9	981 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	HOMER2	Q9NSB8	354 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	TFIP11	Q9UBB9	837 aa	Known RBP	13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	RCOR1	Q9UKL0	485 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	CEP131	Q9UPN4	1083 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	PFAS	O15067	1338 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	ADGRA2	Q96PE1	1338 aa		13.58	□□□□□ -0.24
PRPF8-212	ENST00000575116	GOLGA6L22	H0YM25	854 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	CA12	O43570	354 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	TLR2	O60603	784 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	YEATS4	O95619	227 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	CYP3A4	P08684	503 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	ERCC3	P19447	782 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	HOXA13	P31271	388 aa	Predicted RBP	13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	RPS6	P62753	249 aa	Known RBP	13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	INF2	Q27J81	1249 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	NOM1	Q5C9Z4	860 aa	Known RBP	13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	ANO1	Q5XXA6	986 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	NSMF	Q6X4W1	530 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	NEK8	Q86SG6	692 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	NCAPG2	Q86XI2	1143 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	ANKRD13C	Q8N6S4	541 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	USP28	Q96RU2	1077 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	ZIC5	Q96T25	663 aa		13.57	□□□□□ -0.24
PRPF8-212	ENST00000575116	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	FAM205C	A6NFA0	338 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	STRN	O43815	780 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	BCR	P11274	1271 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	GCFC2	P16383	781 aa	Known RBP	13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	NCL	P19338	710 aa	Known RBP	13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	SREBF1	P36956	1147 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	GRM1	Q13255	1194 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	BAAT	Q14032	418 aa	Predicted RBP	13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	SLC39A14	Q15043	492 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	TTC38	Q5R3I4	469 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	PPP4R3A	Q6IN85	833 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	MOXD1	Q6UVY6	613 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	C17orf99	Q6UX52	265 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	FCHSD1	Q86WN1	690 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	ABRA	Q8N0Z2	381 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	ANKRD35	Q8N283	1001 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	TMEM87A	Q8NBN3	555 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	LINC00301	Q8NCQ3	95 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	CRYGN	Q8WXF5	182 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	SPATA32	Q96LK8	384 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	A1CF	Q9NQ94	594 aa	Known RBP	13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	CYP39A1	Q9NYL5	469 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	CNPY2	Q9Y2B0	182 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	ELP1	O95163	1332 aa		13.56	□□□□□ -0.24
PRPF8-212	ENST00000575116	TCHH	Q07283	1943 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	PEX10	O60683	326 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	AOC2	O75106	756 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	PTMS	P20962	102 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	CYP3A7	P24462	503 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	MAPK4	P31152	587 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	CIITA	P33076	1130 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	MCM4	P33991	863 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	VEGFB	P49765	207 aa		13.55	□□□□□ -0.24

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