RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MCM4P33991 863 aa27.46■■□□□ 1.99
ATPAF1-213ENST00000574428 ATL3Q6DD88 541 aa27.46■■□□□ 1.99
ATPAF1-213ENST00000574428 SPATC1LQ9H0A9 340 aa27.46■■□□□ 1.99
ATPAF1-213ENST00000574428 RBBP6Q7Z6E9 1792 aaKnown RBP27.46■■□□□ 1.99
ATPAF1-213ENST00000574428 ZIC5Q96T25 663 aa27.45■■□□□ 1.99
ATPAF1-213ENST00000574428 RABGAP1Q9Y3P9 1069 aa27.45■■□□□ 1.99
ATPAF1-213ENST00000574428 ANO1Q5XXA6 986 aa27.45■■□□□ 1.98
ATPAF1-213ENST00000574428 FCHSD1Q86WN1 690 aa27.45■■□□□ 1.98
ATPAF1-213ENST00000574428 MCF2L2Q86YR7 1114 aa27.45■■□□□ 1.98
ATPAF1-213ENST00000574428 TBCKQ8TEA7 893 aa27.45■■□□□ 1.98
ATPAF1-213ENST00000574428 PARK7Q99497 189 aaKnown RBP27.45■■□□□ 1.98
ATPAF1-213ENST00000574428 RTEL1Q9NZ71 1219 aa27.45■■□□□ 1.98
ATPAF1-213ENST00000574428 PCDHB6Q9Y5E3 794 aa27.45■■□□□ 1.98
ATPAF1-213ENST00000574428 TKFCQ3LXA3 575 aa27.44■■□□□ 1.98
ATPAF1-213ENST00000574428 RIOX2Q8IUF8 465 aa27.44■■□□□ 1.98
ATPAF1-213ENST00000574428 ANO3Q9BYT9 981 aa27.44■■□□□ 1.98
ATPAF1-213ENST00000574428 POLR3EQ9NVU0 708 aa27.44■■□□□ 1.98
ATPAF1-213ENST00000574428 SPDYE3A6NKU9 549 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 HSD17B4P51659 736 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 AP3B2Q13367 1082 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 SF3A1Q15459 793 aaKnown RBP27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 DEFB115Q30KQ5 88 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 TTC38Q5R3I4 469 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 GTF3C2Q8WUA4 911 aaPredicted RBP27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 LEO1Q8WVC0 666 aaPredicted RBP27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 SPATA32Q96LK8 384 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 MOV10L1Q9BXT6 1211 aaKnown RBP27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 SCAND2PQ9GZW5 306 aaPredicted RBP27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 RASSF10A6NK89 507 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 TRAPPC10P48553 1259 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 Q3C1V9 767 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 NSMFQ6X4W1 530 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 IFNL1Q8IU54 200 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 ACAD9Q9H845 621 aa27.43■■□□□ 1.98
ATPAF1-213ENST00000574428 GOLGA6L22H0YM25 854 aa27.42■■□□□ 1.98
ATPAF1-213ENST00000574428 NASPP49321 788 aaPredicted RBP27.42■■□□□ 1.98
ATPAF1-213ENST00000574428 INHBEP58166 350 aa27.42■■□□□ 1.98
ATPAF1-213ENST00000574428 SREBF2Q12772 1141 aa27.42■■□□□ 1.98
ATPAF1-213ENST00000574428 SLC30A10Q6XR72 485 aa27.42■■□□□ 1.98
ATPAF1-213ENST00000574428 TEX2Q8IWB9 1127 aa27.42■■□□□ 1.98
ATPAF1-213ENST00000574428 PRPF40AO75400 957 aaKnown RBP27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 ERVK-9P63128 1117 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 ERVK-24P63145 666 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 GHRHRQ02643 423 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 ZNF174Q15697 407 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 MCTP2Q6DN12 878 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 NCAPG2Q86XI2 1143 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 ANKRD13CQ8N6S4 541 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 CAPNS2Q96L46 248 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 COL20A1Q9P218 1284 aa27.41■■□□□ 1.98
ATPAF1-213ENST00000574428 FOSP01100 380 aaPredicted RBP27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 RPS6P62753 249 aaKnown RBP27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 STK38Q15208 465 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 RNF207Q6ZRF8 634 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 NEK8Q86SG6 692 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 CHST13Q8NET6 341 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 R3HDMLQ9H3Y0 253 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 AOC2O75106 756 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 GCLCP48506 637 aaPredicted RBP27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 LETM2Q2VYF4 491 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 TMEM87AQ8NBN3 555 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 LINC00301Q8NCQ3 95 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 ZCCHC17Q9NP64 241 aaKnown RBP27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 RCOR1Q9UKL0 485 aa27.4■■□□□ 1.98
ATPAF1-213ENST00000574428 YEATS4O95619 227 aa27.39■■□□□ 1.98
ATPAF1-213ENST00000574428 ERCC3P19447 782 aa27.39■■□□□ 1.98
ATPAF1-213ENST00000574428 MCM7P33993 719 aa27.39■■□□□ 1.98
ATPAF1-213ENST00000574428 BAATQ14032 418 aaPredicted RBP27.39■■□□□ 1.98
ATPAF1-213ENST00000574428 PTPAQ15257 358 aa27.39■■□□□ 1.98
ATPAF1-213ENST00000574428 GPRC5AQ8NFJ5 357 aa27.39■■□□□ 1.98
ATPAF1-213ENST00000574428 SYTL5Q8TDW5 730 aaPredicted RBP27.39■■□□□ 1.98
ATPAF1-213ENST00000574428 DDX11L8A8MPP1 907 aa27.38■■□□□ 1.97
ATPAF1-213ENST00000574428 EDIL3O43854 480 aa27.38■■□□□ 1.97
ATPAF1-213ENST00000574428 NOGQ13253 232 aa27.38■■□□□ 1.97
ATPAF1-213ENST00000574428 TAF1CQ15572 869 aaPredicted RBP27.38■■□□□ 1.97
ATPAF1-213ENST00000574428 A1CFQ9NQ94 594 aaKnown RBP27.38■■□□□ 1.97
ATPAF1-213ENST00000574428 MYH7BA7E2Y1 1941 aa27.38■■□□□ 1.97
ATPAF1-213ENST00000574428 SLC25A27O95847 323 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 HTRA3P83110 453 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 CSPP1Q1MSJ5 1256 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 CCNT1O60563 726 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 SREBF1P36956 1147 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 TM4SF4P48230 202 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 SLC39A14Q15043 492 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 TPRNQ4KMQ1 711 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 SAMD3Q8N6K7 520 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 PURBQ96QR8 312 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 LMBRD1Q9NUN5 540 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 MAP3K20Q9NYL2 800 aaKnown RBP27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 CYP39A1Q9NYL5 469 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 MORF4L1Q9UBU8 362 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 FBXO40Q9UH90 709 aa27.37■■□□□ 1.97
ATPAF1-213ENST00000574428 SPTLC2O15270 562 aa27.36■■□□□ 1.97
ATPAF1-213ENST00000574428 UBXN2AP68543 259 aa27.36■■□□□ 1.97
ATPAF1-213ENST00000574428 ARHGAP4P98171 946 aa27.36■■□□□ 1.97
ATPAF1-213ENST00000574428 PORCNQ9H237 461 aa27.36■■□□□ 1.97
ATPAF1-213ENST00000574428 MRVI1Q9Y6F6 885 aa27.36■■□□□ 1.97
ATPAF1-213ENST00000574428 ELP1O95163 1332 aa27.36■■□□□ 1.97
ATPAF1-213ENST00000574428 ADGRA2Q96PE1 1338 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms