RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 MYSM1Q5VVJ2 828 aa24.24■■□□□ 1.47
CXCL16-203ENST00000574412 PARK7Q99497 189 aaKnown RBP24.24■■□□□ 1.47
CXCL16-203ENST00000574412 TFIP11Q9UBB9 837 aaKnown RBP24.24■■□□□ 1.47
CXCL16-203ENST00000574412 CCDC194A0A1B0GVG4 234 aa24.23■■□□□ 1.47
CXCL16-203ENST00000574412 CEBPZQ03701 1054 aaKnown RBP24.23■■□□□ 1.47
CXCL16-203ENST00000574412 ANKRD13CQ8N6S4 541 aa24.23■■□□□ 1.47
CXCL16-203ENST00000574412 RABGAP1Q9Y3P9 1069 aa24.23■■□□□ 1.47
CXCL16-203ENST00000574412 MYH7BA7E2Y1 1941 aa24.23■■□□□ 1.47
CXCL16-203ENST00000574412 CLK2P49760 499 aaKnown RBP24.22■■□□□ 1.47
CXCL16-203ENST00000574412 TAF1CQ15572 869 aaPredicted RBP24.22■■□□□ 1.47
CXCL16-203ENST00000574412 FCHSD1Q86WN1 690 aa24.22■■□□□ 1.47
CXCL16-203ENST00000574412 R3HDMLQ9H3Y0 253 aa24.22■■□□□ 1.47
CXCL16-203ENST00000574412 DDX49Q9Y6V7 483 aaKnown RBP24.22■■□□□ 1.47
CXCL16-203ENST00000574412 INHBEP58166 350 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 NOGQ13253 232 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 ATL3Q6DD88 541 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 NSMFQ6X4W1 530 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 NCAPG2Q86XI2 1143 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 ZNF396Q96N95 335 aaPredicted RBP24.21■■□□□ 1.47
CXCL16-203ENST00000574412 MOV10L1Q9BXT6 1211 aaKnown RBP24.21■■□□□ 1.47
CXCL16-203ENST00000574412 SCAND2PQ9GZW5 306 aaPredicted RBP24.21■■□□□ 1.47
CXCL16-203ENST00000574412 CFAP45Q9UL16 551 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 PNMA2Q9UL42 364 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 GCOM1H8Y6P7 765 aaPredicted RBP24.21■■□□□ 1.47
CXCL16-203ENST00000574412 GADD45BO75293 160 aaPredicted RBP24.21■■□□□ 1.47
CXCL16-203ENST00000574412 POLR2MP0CAP2 368 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 ERVK-9P63128 1117 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 ERVK-24P63145 666 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 INF2Q27J81 1249 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 GLT8D2Q9H1C3 349 aa24.21■■□□□ 1.47
CXCL16-203ENST00000574412 PCNTO95613 3336 aa24.2■■□□□ 1.47
CXCL16-203ENST00000574412 WNT7AO00755 349 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 KLHL40Q2TBA0 621 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 SLC30A10Q6XR72 485 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 KRT25Q7Z3Z0 450 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 RIOX2Q8IUF8 465 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 GPT2Q8TD30 523 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 USP28Q96RU2 1077 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 ACAD9Q9H845 621 aa24.2■■□□□ 1.46
CXCL16-203ENST00000574412 TOB1P50616 345 aaPredicted RBP24.19■■□□□ 1.46
CXCL16-203ENST00000574412 NONOQ15233 471 aaKnown RBP eCLIP24.19■■□□□ 1.46
CXCL16-203ENST00000574412 MCF2L2Q86YR7 1114 aa24.19■■□□□ 1.46
CXCL16-203ENST00000574412 LEO1Q8WVC0 666 aaPredicted RBP24.19■■□□□ 1.46
CXCL16-203ENST00000574412 SPATA32Q96LK8 384 aa24.19■■□□□ 1.46
CXCL16-203ENST00000574412 CPA4Q9UI42 421 aa24.19■■□□□ 1.46
CXCL16-203ENST00000574412 ELP1O95163 1332 aa24.19■■□□□ 1.46
CXCL16-203ENST00000574412 ECM2O94769 699 aaPredicted RBP24.18■■□□□ 1.46
CXCL16-203ENST00000574412 ERCC3P19447 782 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 TM4SF4P48230 202 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 GCLCP48506 637 aaPredicted RBP24.18■■□□□ 1.46
CXCL16-203ENST00000574412 TKFCQ3LXA3 575 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 WDR78Q5VTH9 848 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 TBCKQ8TEA7 893 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 GTF3C2Q8WUA4 911 aaPredicted RBP24.18■■□□□ 1.46
CXCL16-203ENST00000574412 ANO3Q9BYT9 981 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 CLIC4Q9Y696 253 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 SPDYE3A6NKU9 549 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 PIK3CDO00329 1044 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 VEGFBP49765 207 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 RPS6P62753 249 aaKnown RBP24.18■■□□□ 1.46
CXCL16-203ENST00000574412 RNF207Q6ZRF8 634 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 GPRC5AQ8NFJ5 357 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 PORCNQ9H237 461 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 COL20A1Q9P218 1284 aa24.18■■□□□ 1.46
CXCL16-203ENST00000574412 HSD17B4P51659 736 aa24.17■■□□□ 1.46
CXCL16-203ENST00000574412 BAATQ14032 418 aaPredicted RBP24.17■■□□□ 1.46
CXCL16-203ENST00000574412 PURBQ96QR8 312 aaKnown RBP24.17■■□□□ 1.46
CXCL16-203ENST00000574412 ZCCHC17Q9NP64 241 aaKnown RBP24.17■■□□□ 1.46
CXCL16-203ENST00000574412 NOL7Q9UMY1 257 aaKnown RBP24.17■■□□□ 1.46
CXCL16-203ENST00000574412 PCDHB6Q9Y5E3 794 aa24.17■■□□□ 1.46
CXCL16-203ENST00000574412 LCTP09848 1927 aa24.16■■□□□ 1.46
CXCL16-203ENST00000574412 MBD3O95983 291 aa24.16■■□□□ 1.46
CXCL16-203ENST00000574412 UBE2HP62256 183 aa24.16■■□□□ 1.46
CXCL16-203ENST00000574412 UBXN2AP68543 259 aa24.16■■□□□ 1.46
CXCL16-203ENST00000574412 RILPL1Q5EBL4 403 aa24.16■■□□□ 1.46
CXCL16-203ENST00000574412 CHST13Q8NET6 341 aa24.16■■□□□ 1.46
CXCL16-203ENST00000574412 EFCC1Q9HA90 598 aa24.16■■□□□ 1.46
CXCL16-203ENST00000574412 A1CFQ9NQ94 594 aaKnown RBP24.16■■□□□ 1.46
CXCL16-203ENST00000574412 CRHR2Q13324 411 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 AP3B2Q13367 1082 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 RTEL1Q9NZ71 1219 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 RCOR1Q9UKL0 485 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 ZNFX1Q9P2E3 1918 aaKnown RBP24.15■■□□□ 1.46
CXCL16-203ENST00000574412 ADGRA2Q96PE1 1338 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 PLXNB2O15031 1838 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 SLC25A27O95847 323 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 ZNF174Q15697 407 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 LETM2Q2VYF4 491 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 TPRNQ4KMQ1 711 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 TTC38Q5R3I4 469 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 ANKRD35Q8N283 1001 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 SYTL5Q8TDW5 730 aaPredicted RBP24.15■■□□□ 1.46
CXCL16-203ENST00000574412 CYP39A1Q9NYL5 469 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 MORF4L1Q9UBU8 362 aa24.15■■□□□ 1.46
CXCL16-203ENST00000574412 SF3A1Q15459 793 aaKnown RBP24.14■■□□□ 1.45
CXCL16-203ENST00000574412 ANO1Q5XXA6 986 aa24.14■■□□□ 1.45
CXCL16-203ENST00000574412 ZFYVE28Q9HCC9 887 aa24.14■■□□□ 1.45
CXCL16-203ENST00000574412 FOSP01100 380 aaPredicted RBP24.13■■□□□ 1.45
CXCL16-203ENST00000574412 MCM7P33993 719 aa24.13■■□□□ 1.45
CXCL16-203ENST00000574412 NEK8Q86SG6 692 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms