RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 SAMD3Q8N6K7 520 aa38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 ZSCAN31Q96LW9 406 aaPredicted RBP38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 SLC26A6Q9BXS9 759 aa38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 BIN2Q9UBW5 565 aaPredicted RBP38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 CNTN2Q02246 1040 aa38.2■■■■□ 3.71
CTDNEP1-209ENST00000574205 GHRHRQ02643 423 aa38.2■■■■□ 3.71
CTDNEP1-209ENST00000574205 ZNF467Q7Z7K2 595 aaPredicted RBP38.2■■■■□ 3.71
CTDNEP1-209ENST00000574205 MAP3K20Q9NYL2 800 aaKnown RBP38.2■■■■□ 3.71
CTDNEP1-209ENST00000574205 CFBP00751 764 aa38.19■■■■□ 3.7
CTDNEP1-209ENST00000574205 CALML3P27482 149 aa38.19■■■■□ 3.7
CTDNEP1-209ENST00000574205 WWC2Q6AWC2 1192 aa38.19■■■■□ 3.7
CTDNEP1-209ENST00000574205 NECAB1Q8N987 351 aa38.19■■■■□ 3.7
CTDNEP1-209ENST00000574205 GPKOWQ92917 476 aaPredicted RBP eCLIP38.19■■■■□ 3.7
CTDNEP1-209ENST00000574205 PPFIA3O75145 1194 aa38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 IGHA2P01877 340 aa38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 INHAP05111 366 aa38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 SCG2P13521 617 aa38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 SSRP1Q08945 709 aaKnown RBP38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 MSL3Q8N5Y2 521 aaKnown RBP38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 TBC1D5Q92609 795 aa38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 SH2B1Q9NRF2 756 aaPredicted RBP38.18■■■■□ 3.7
CTDNEP1-209ENST00000574205 HSD17B4P51659 736 aa38.17■■■■□ 3.7
CTDNEP1-209ENST00000574205 UBXN2AP68543 259 aa38.17■■■■□ 3.7
CTDNEP1-209ENST00000574205 PKN1Q16512 942 aa38.17■■■■□ 3.7
CTDNEP1-209ENST00000574205 MFSD14CQ5VZR4 134 aa38.17■■■■□ 3.7
CTDNEP1-209ENST00000574205 ZNF333Q96JL9 665 aa38.17■■■■□ 3.7
CTDNEP1-209ENST00000574205 FGD4Q96M96 766 aa38.17■■■■□ 3.7
CTDNEP1-209ENST00000574205 BARHL2Q9NY43 387 aa38.17■■■■□ 3.7
CTDNEP1-209ENST00000574205 MCM2P49736 904 aa38.16■■■■□ 3.7
CTDNEP1-209ENST00000574205 PPP1R18Q6NYC8 613 aa38.16■■■■□ 3.7
CTDNEP1-209ENST00000574205 TINF2Q9BSI4 451 aa38.16■■■■□ 3.7
CTDNEP1-209ENST00000574205 ADD3Q9UEY8 706 aaKnown RBP38.16■■■■□ 3.7
CTDNEP1-209ENST00000574205 SOWAHBA6NEL2 793 aa38.15■■■■□ 3.7
CTDNEP1-209ENST00000574205 MAMDC4Q6UXC1 1216 aa38.15■■■■□ 3.7
CTDNEP1-209ENST00000574205 NAPAP54920 295 aa38.14■■■■□ 3.7
CTDNEP1-209ENST00000574205 SYTL5Q8TDW5 730 aaPredicted RBP38.14■■■■□ 3.7
CTDNEP1-209ENST00000574205 ABHD8Q96I13 439 aa38.14■■■■□ 3.7
CTDNEP1-209ENST00000574205 PURBQ96QR8 312 aaKnown RBP38.14■■■■□ 3.7
CTDNEP1-209ENST00000574205 ASTN1O14525 1302 aa38.13■■■■□ 3.7
CTDNEP1-209ENST00000574205 SYNGAP1Q96PV0 1343 aa38.13■■■■□ 3.7
CTDNEP1-209ENST00000574205 GCOM1H8Y6P7 765 aaPredicted RBP38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 STXBP3O00186 592 aa38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 DEXIO95424 95 aa38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 POLR2MP0CAP2 368 aa38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 CYP2C19P33261 490 aa38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 TRIM32Q13049 653 aa38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 DNERQ8NFT8 737 aa38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 STK36Q9NRP7 1315 aa38.13■■■■□ 3.69
CTDNEP1-209ENST00000574205 CD2BP2O95400 341 aaKnown RBP38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 CTDNEP1O95476 244 aa38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 MAP3K21Q5TCX8 1036 aa38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 TYW1BQ6NUM6 668 aa38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 PSTPIP2Q9H939 334 aa38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 MCM3APO60318 1980 aa38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 LOC102724159A0A0B4J2E5 919 aa38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 PRKAR2AP13861 404 aaKnown RBP38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 PWP2Q15269 919 aaKnown RBP38.12■■■■□ 3.69
CTDNEP1-209ENST00000574205 ASB14A6NK59 587 aa38.11■■■■□ 3.69
CTDNEP1-209ENST00000574205 CACNB2Q08289 660 aaPredicted RBP38.11■■■■□ 3.69
CTDNEP1-209ENST00000574205 ST3GAL1Q11201 340 aa38.11■■■■□ 3.69
CTDNEP1-209ENST00000574205 COL20A1Q9P218 1284 aa38.11■■■■□ 3.69
CTDNEP1-209ENST00000574205 PIK3CDO00329 1044 aa38.1■■■■□ 3.69
CTDNEP1-209ENST00000574205 HOXA13P31271 388 aaPredicted RBP38.1■■■■□ 3.69
CTDNEP1-209ENST00000574205 ALDH5A1P51649 535 aaPredicted RBP38.1■■■■□ 3.69
CTDNEP1-209ENST00000574205 NSUN7Q8NE18 718 aaKnown RBP38.1■■■■□ 3.69
CTDNEP1-209ENST00000574205 CCDC12Q8WUD4 166 aaPredicted RBP38.1■■■■□ 3.69
CTDNEP1-209ENST00000574205 CUL5Q93034 780 aa38.1■■■■□ 3.69
CTDNEP1-209ENST00000574205 ARMCX2Q7L311 632 aa38.09■■■■□ 3.69
CTDNEP1-209ENST00000574205 CCDC83Q8IWF9 413 aa38.09■■■■□ 3.69
CTDNEP1-209ENST00000574205 RPTORQ8N122 1335 aa38.09■■■■□ 3.69
CTDNEP1-209ENST00000574205 MEIS2O14770 477 aa38.08■■■■□ 3.69
CTDNEP1-209ENST00000574205 TEX2Q8IWB9 1127 aa38.08■■■■□ 3.69
CTDNEP1-209ENST00000574205 TAAR1Q96RJ0 339 aa38.08■■■■□ 3.69
CTDNEP1-209ENST00000574205 MPHOSPH6Q99547 160 aaKnown RBP38.07■■■■□ 3.69
CTDNEP1-209ENST00000574205 SH3GLB2Q9NR46 395 aa38.07■■■■□ 3.69
CTDNEP1-209ENST00000574205 NRBP1Q9UHY1 535 aa38.07■■■■□ 3.69
CTDNEP1-209ENST00000574205 MTFR1Q15390 333 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 USP17L6PQ6QN14 398 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 SMARCC2Q8TAQ2 1214 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 MORC4Q8TE76 937 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 NSUN6Q8TEA1 469 aaKnown RBP38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 RMDN3Q96TC7 470 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 GLT8D2Q9H1C3 349 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 HMX1Q9NP08 348 aaPredicted RBP38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 RIC8AQ9NPQ8 531 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 CNPY2Q9Y2B0 182 aa38.07■■■■□ 3.68
CTDNEP1-209ENST00000574205 ESYT2A0FGR8 921 aa38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 SMCO2A6NFE2 343 aa38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 B4DLN1 442 aa38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 SNAI1O95863 264 aaPredicted RBP38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 MYCP01106 439 aaPredicted RBP38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 CYBAP13498 195 aa38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 MRPL12P52815 198 aaKnown RBP38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 CCDC148Q8NFR7 591 aa38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 TMX3Q96JJ7 454 aa38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 LLPHQ9BRT6 129 aaKnown RBP38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 CDKN2AIPQ9NXV6 580 aaPredicted RBP38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 ORC3Q9UBD5 711 aaPredicted RBP38.06■■■■□ 3.68
CTDNEP1-209ENST00000574205 CCL5P13501 91 aa38.05■■■■□ 3.68
CTDNEP1-209ENST00000574205 ADCY7P51828 1080 aa38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms