RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 CCDC17Q96LX7 622 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 MED15Q96RN5 788 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 NUP88Q99567 741 aaPredicted RBP17.96■□□□□ 0.47
USP43-204ENST00000573955 SIPA1L1O43166 1804 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 TNNT1P13805 278 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 JAG1P78504 1218 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 TTC31Q49AM3 519 aaPredicted RBP17.96■□□□□ 0.47
USP43-204ENST00000573955 CC2D2BQ6DHV5 1058 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 PDXDC2PQ6P474 469 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 FBXO38Q6PIJ6 1188 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 RNF217Q8TC41 542 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 C16orf45Q96MC5 204 aaPredicted RBP17.96■□□□□ 0.47
USP43-204ENST00000573955 ZNF646O15015 1829 aaPredicted RBP17.95■□□□□ 0.46
USP43-204ENST00000573955 TMEM232C9JQI7 657 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 NEMFO60524 1076 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 SLC1A4P43007 532 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 TNNI2P48788 182 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 ICA1Q05084 483 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 NLGN2Q8NFZ4 835 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 MED4Q9NPJ6 270 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 SAMSN1Q9NSI8 373 aaKnown RBP17.95■□□□□ 0.46
USP43-204ENST00000573955 UBA7P41226 1012 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 TRIML1Q8N9V2 468 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP43-204ENST00000573955 UIMC1Q96RL1 719 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 DACH1Q9UI36 760 aa17.95■□□□□ 0.46
USP43-204ENST00000573955 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 TECP42680 631 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 ABCB5Q2M3G0 1257 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 DNAJC21Q5F1R6 531 aaKnown RBP17.94■□□□□ 0.46
USP43-204ENST00000573955 SLFN13Q68D06 897 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 DISC1Q9NRI5 854 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 GH2P01242 217 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 OR52Z1P0C646 297 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 SKILP12757 684 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 POLD1P28340 1107 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 RRP1BQ14684 758 aaKnown RBP17.94■□□□□ 0.46
USP43-204ENST00000573955 ZSCAN26Q16670 478 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 RSBN1LQ6PCB5 846 aaPredicted RBP17.94■□□□□ 0.46
USP43-204ENST00000573955 SRLQ86TD4 932 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 SIAH1Q8IUQ4 282 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 SLC16A10Q8TF71 515 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 KANSL2Q9H9L4 492 aa17.94■□□□□ 0.46
USP43-204ENST00000573955 TDP2O95551 362 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 GPATCH4Q5T3I0 446 aaKnown RBP17.93■□□□□ 0.46
USP43-204ENST00000573955 RRAGBQ5VZM2 374 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 RTKN2Q8IZC4 609 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 MTFR1LQ9H019 292 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 VEZTQ9HBM0 779 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 MAPK8IP1Q9UQF2 711 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 TXKP42681 527 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 GOLGA8FQ08AF8 430 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 GOLGA8DPQ0D2H9 430 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 IKQ13123 557 aaPredicted RBP17.93■□□□□ 0.46
USP43-204ENST00000573955 TATDN1Q6P1N9 297 aa17.93■□□□□ 0.46
USP43-204ENST00000573955 ZBTB5O15062 677 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 TAL1P17542 331 aaPredicted RBP17.92■□□□□ 0.46
USP43-204ENST00000573955 RASSF7Q02833 373 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 GPS2Q13227 327 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 GSDMAQ96QA5 445 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 SLC37A4O43826 429 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 DLGAP5Q15398 846 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 ARMCX5Q6P1M9 558 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 CDAN1Q8IWY9 1227 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 ENOX1Q8TC92 643 aaKnown RBP17.92■□□□□ 0.46
USP43-204ENST00000573955 LRRC15Q8TF66 581 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 TMOD2Q9NZR1 351 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 CTNND2Q9UQB3 1225 aa17.92■□□□□ 0.46
USP43-204ENST00000573955 RRP15Q9Y3B9 282 aaKnown RBP17.92■□□□□ 0.46
USP43-204ENST00000573955 SYNRGQ9UMZ2 1314 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 ESYT2A0FGR8 921 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 CCZ1BP86790 482 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 CCZ1P86791 482 aaPredicted RBP17.91■□□□□ 0.46
USP43-204ENST00000573955 DHX8Q14562 1220 aaKnown RBP17.91■□□□□ 0.46
USP43-204ENST00000573955 TMEM179Q6ZVK1 233 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 GJA10Q969M2 543 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.91■□□□□ 0.46
USP43-204ENST00000573955 GREB1LQ9C091 1923 aaPredicted RBP17.91■□□□□ 0.46
USP43-204ENST00000573955 GTPBP6O43824 516 aaPredicted RBP17.91■□□□□ 0.46
USP43-204ENST00000573955 QRICH1Q2TAL8 776 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 DALRD3Q5D0E6 543 aaKnown RBP17.91■□□□□ 0.46
USP43-204ENST00000573955 OGFOD1Q8N543 542 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.91■□□□□ 0.46
USP43-204ENST00000573955 INTS13Q9NVM9 706 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
USP43-204ENST00000573955 USP27XA6NNY8 438 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L15C9J2P7 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L13C9JLJ4 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L11C9JVI0 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L18D6R9N7 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L22D6RA61 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L17D6RBQ6 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L19D6RCP7 530 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms