RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 CALML3P27482 149 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 CPT1AP50416 773 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 MRPL12P52815 198 aaKnown RBP14.32□□□□□ -0.12
CCDC40-210ENST00000573903 PDE4DQ08499 809 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 GRIN2CQ14957 1233 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 RAB30Q15771 203 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 AKNAD1Q5T1N1 836 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 MORC4Q8TE76 937 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 TTC14Q96N46 770 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 WDR11Q9BZH6 1224 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 GPHNQ9NQX3 736 aaPredicted RBP14.32□□□□□ -0.12
CCDC40-210ENST00000573903 DDX49Q9Y6V7 483 aaKnown RBP14.32□□□□□ -0.12
CCDC40-210ENST00000573903 UNC80Q8N2C7 3258 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 B4GALT4O60513 344 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 PSMC6P62333 389 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 C16orf59Q7L2K0 433 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 ZNF589Q86UQ0 364 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-210ENST00000573903 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
CCDC40-210ENST00000573903 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 ESR2Q92731 530 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 SYMPKQ92797 1274 aaKnown RBP14.31□□□□□ -0.12
CCDC40-210ENST00000573903 PURBQ96QR8 312 aaKnown RBP14.31□□□□□ -0.12
CCDC40-210ENST00000573903 PBX4Q9BYU1 374 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 LNPKQ9C0E8 428 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 WDR19Q8NEZ3 1342 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
CCDC40-210ENST00000573903 NKRFO15226 690 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC40-210ENST00000573903 MYL3P08590 195 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 SUPT20HL2P0C7V6 817 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 NT5C2P49902 561 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 CCL23P55773 120 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 ZNF543Q08ER8 600 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 GPATCH4Q5T3I0 446 aaKnown RBP14.3□□□□□ -0.12
CCDC40-210ENST00000573903 RASIP1Q5U651 963 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 SLC30A10Q6XR72 485 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 IQCA1Q86XH1 822 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 OR6J1Q8NGC5 347 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 NOC4LQ9BVI4 516 aaKnown RBP14.3□□□□□ -0.12
CCDC40-210ENST00000573903 TRPV6Q9H1D0 765 aa14.3□□□□□ -0.12
CCDC40-210ENST00000573903 GRXCR1A8MXD5 290 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 ZNF213O14771 459 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 PTGS1P23219 599 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 PBX2P40425 430 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 FAM47CQ5HY64 1035 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 OTOP2Q7RTS6 562 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 SCFD2Q8WU76 684 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-210ENST00000573903 ALDH8A1Q9H2A2 487 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-210ENST00000573903 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-210ENST00000573903 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 GBF1Q92538 1859 aa14.29□□□□□ -0.12
CCDC40-210ENST00000573903 A0A0C4DFX4 3053 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 ZBBXA8MT70 800 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 GRIN2DO15399 1336 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 PFKMP08237 780 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 SNHG28P0DPA3 235 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 SDSP20132 328 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
CCDC40-210ENST00000573903 PURAQ00577 322 aaKnown RBP14.28□□□□□ -0.12
CCDC40-210ENST00000573903 USH1GQ495M9 461 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 TMEM63BQ5T3F8 832 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 B4GALNT3Q6L9W6 998 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 TBC1D10CQ8IV04 446 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 CLEC4DQ8WXI8 215 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 KAT14Q9H8E8 782 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 SLC28A3Q9HAS3 691 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 SLC4A7Q9Y6M7 1214 aa14.28□□□□□ -0.12
CCDC40-210ENST00000573903 TNKSO95271 1327 aa14.27□□□□□ -0.12
CCDC40-210ENST00000573903 NEDD4P46934 1319 aa14.27□□□□□ -0.12
CCDC40-210ENST00000573903 RBM47A0AV96 593 aaKnown RBP14.27□□□□□ -0.13
CCDC40-210ENST00000573903 HIP1O00291 1037 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 KPNA6O60684 536 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 TTLL4Q14679 1199 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 DGKHQ86XP1 1220 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 ZKSCAN3Q9BRR0 538 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 WNT8AQ9H1J5 351 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 PRDM12Q9H4Q4 367 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 CXXC1Q9P0U4 656 aaPredicted RBP14.27□□□□□ -0.13
CCDC40-210ENST00000573903 CDH23Q9H251 3354 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 MYH6P13533 1939 aa14.27□□□□□ -0.13
CCDC40-210ENST00000573903 EYSQ5T1H1 3165 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 DHX16O60231 1041 aaKnown RBP14.26□□□□□ -0.13
CCDC40-210ENST00000573903 GOLGA8HP0CJ92 632 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 TXNP10599 105 aaKnown RBP14.26□□□□□ -0.13
CCDC40-210ENST00000573903 ACTN1P12814 892 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 IRX6P78412 446 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-210ENST00000573903 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-210ENST00000573903 TJAP1Q5JTD0 557 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 CWC27Q6UX04 472 aaKnown RBP14.26□□□□□ -0.13
CCDC40-210ENST00000573903 CHD1LQ86WJ1 897 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 SMC5Q8IY18 1101 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 PNMA1Q8ND90 353 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 PPM1EQ8WY54 764 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms