RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 APOA5Q6Q788 366 aa32.22■■■□□ 2.75
SCARF1-207ENST00000573867 FBXO16Q8IX29 292 aaPredicted RBP32.22■■■□□ 2.75
SCARF1-207ENST00000573867 CMTR1Q8N1G2 835 aaKnown RBP32.22■■■□□ 2.75
SCARF1-207ENST00000573867 PIBF1Q8WXW3 757 aa32.22■■■□□ 2.75
SCARF1-207ENST00000573867 SPZ1Q9BXG8 430 aa32.22■■■□□ 2.75
SCARF1-207ENST00000573867 C11orf97A0A1B0GVM6 126 aaPredicted RBP32.21■■■□□ 2.75
SCARF1-207ENST00000573867 ADAMTS4O75173 837 aa32.21■■■□□ 2.75
SCARF1-207ENST00000573867 KIF5BP33176 963 aa32.21■■■□□ 2.75
SCARF1-207ENST00000573867 EEPD1Q7L9B9 569 aa32.21■■■□□ 2.75
SCARF1-207ENST00000573867 MICU3Q86XE3 530 aa32.21■■■□□ 2.75
SCARF1-207ENST00000573867 ARRDC4Q8NCT1 418 aa32.21■■■□□ 2.75
SCARF1-207ENST00000573867 SYTL5Q8TDW5 730 aaPredicted RBP32.21■■■□□ 2.75
SCARF1-207ENST00000573867 PDGFCQ9NRA1 345 aa32.21■■■□□ 2.75
SCARF1-207ENST00000573867 ADD3Q9UEY8 706 aaKnown RBP32.21■■■□□ 2.75
SCARF1-207ENST00000573867 PCDHA1Q9Y5I3 950 aa32.21■■■□□ 2.75
SCARF1-207ENST00000573867 PNMA6FA0A0J9YX94 578 aa32.2■■■□□ 2.75
SCARF1-207ENST00000573867 EPB41L2O43491 1005 aaKnown RBP32.2■■■□□ 2.75
SCARF1-207ENST00000573867 MYCNP04198 464 aaPredicted RBP32.2■■■□□ 2.75
SCARF1-207ENST00000573867 PTGS1P23219 599 aa32.2■■■□□ 2.75
SCARF1-207ENST00000573867 TMEM63BQ5T3F8 832 aa32.2■■■□□ 2.75
SCARF1-207ENST00000573867 TAPT1Q6NXT6 567 aa32.2■■■□□ 2.75
SCARF1-207ENST00000573867 SYNRGQ9UMZ2 1314 aa32.2■■■□□ 2.74
SCARF1-207ENST00000573867 H0YGN5 161 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 HMGB1P09429 215 aaKnown RBP32.19■■■□□ 2.74
SCARF1-207ENST00000573867 CALM1P0DP23 149 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 CALM2P0DP24 149 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 CALM3P0DP25 149 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 EDNRBP24530 442 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 ADCYAP1R1P41586 468 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 FANCBQ8NB91 859 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 TAAR1Q96RJ0 339 aa32.19■■■□□ 2.74
SCARF1-207ENST00000573867 SENP6Q9GZR1 1112 aaPredicted RBP32.19■■■□□ 2.74
SCARF1-207ENST00000573867 MYADML2A6NDP7 307 aa32.18■■■□□ 2.74
SCARF1-207ENST00000573867 DUSP11O75319 330 aaKnown RBP32.18■■■□□ 2.74
SCARF1-207ENST00000573867 GHRHRQ02643 423 aa32.18■■■□□ 2.74
SCARF1-207ENST00000573867 LRRC26Q2I0M4 334 aa32.18■■■□□ 2.74
SCARF1-207ENST00000573867 MCF2L2Q86YR7 1114 aa32.18■■■□□ 2.74
SCARF1-207ENST00000573867 LOC102724159A0A0B4J2E5 919 aa32.17■■■□□ 2.74
SCARF1-207ENST00000573867 SMARCA1P28370 1054 aa32.17■■■□□ 2.74
SCARF1-207ENST00000573867 HSD17B4P51659 736 aa32.17■■■□□ 2.74
SCARF1-207ENST00000573867 PWP2Q15269 919 aaKnown RBP32.17■■■□□ 2.74
SCARF1-207ENST00000573867 BLOC1S2Q6QNY1 142 aa32.17■■■□□ 2.74
SCARF1-207ENST00000573867 TMTC3Q6ZXV5 915 aa32.17■■■□□ 2.74
SCARF1-207ENST00000573867 DNERQ8NFT8 737 aa32.17■■■□□ 2.74
SCARF1-207ENST00000573867 MAF1Q9H063 256 aa32.17■■■□□ 2.74
SCARF1-207ENST00000573867 KBTBD13C9JR72 458 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 CFBP00751 764 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 RPS6KB1P23443 525 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 GNAQP50148 359 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 Q6ZUG5 572 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 KLHDC9Q8NEP7 349 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 LZTS2Q9BRK4 669 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 VTA1Q9NP79 307 aa32.16■■■□□ 2.74
SCARF1-207ENST00000573867 KLF18A0A0U1RQI7 1052 aa32.15■■■□□ 2.74
SCARF1-207ENST00000573867 EVI5O60447 810 aa32.15■■■□□ 2.74
SCARF1-207ENST00000573867 UPF3AQ9H1J1 476 aaKnown RBP32.15■■■□□ 2.74
SCARF1-207ENST00000573867 GNEQ9Y223 722 aaKnown RBP32.15■■■□□ 2.74
SCARF1-207ENST00000573867 CTAGE5O15320 804 aa32.14■■■□□ 2.74
SCARF1-207ENST00000573867 SMPD1P17405 629 aa32.14■■■□□ 2.74
SCARF1-207ENST00000573867 CASTP20810 708 aaKnown RBP32.14■■■□□ 2.74
SCARF1-207ENST00000573867 TNFAIP2Q03169 654 aa32.14■■■□□ 2.74
SCARF1-207ENST00000573867 CCSAPQ6IQ19 270 aaPredicted RBP32.14■■■□□ 2.74
SCARF1-207ENST00000573867 C7orf61Q8IZ16 206 aa32.14■■■□□ 2.74
SCARF1-207ENST00000573867 CCDC82Q8N4S0 544 aa32.14■■■□□ 2.74
SCARF1-207ENST00000573867 FERMT2Q96AC1 680 aa32.14■■■□□ 2.74
SCARF1-207ENST00000573867 RRP36Q96EU6 259 aaKnown RBP32.14■■■□□ 2.74
SCARF1-207ENST00000573867 FAM217BQ9NTX9 383 aaPredicted RBP32.14■■■□□ 2.74
SCARF1-207ENST00000573867 PHF24Q9UPV7 400 aa32.14■■■□□ 2.74
SCARF1-207ENST00000573867 hCG_1642624A0A1W2PR95 340 aa32.13■■■□□ 2.73
SCARF1-207ENST00000573867 ZBTB43O43298 467 aa32.13■■■□□ 2.73
SCARF1-207ENST00000573867 HOXA13P31271 388 aaPredicted RBP32.13■■■□□ 2.73
SCARF1-207ENST00000573867 ATN1P54259 1190 aaPredicted RBP32.13■■■□□ 2.73
SCARF1-207ENST00000573867 APOBRQ0VD83 1088 aa32.13■■■□□ 2.73
SCARF1-207ENST00000573867 SYNE3Q6ZMZ3 975 aa32.13■■■□□ 2.73
SCARF1-207ENST00000573867 RNF180Q86T96 592 aa32.13■■■□□ 2.73
SCARF1-207ENST00000573867 GJA9P57773 515 aa32.12■■■□□ 2.73
SCARF1-207ENST00000573867 PDE4DQ08499 809 aa32.12■■■□□ 2.73
SCARF1-207ENST00000573867 FUT2Q10981 343 aa32.12■■■□□ 2.73
SCARF1-207ENST00000573867 BRF1Q92994 677 aa32.12■■■□□ 2.73
SCARF1-207ENST00000573867 AGXT2Q9BYV1 514 aa32.12■■■□□ 2.73
SCARF1-207ENST00000573867 PCDH10Q9P2E7 1040 aa32.12■■■□□ 2.73
SCARF1-207ENST00000573867 CNTNAP5Q8WYK1 1306 aa32.11■■■□□ 2.73
SCARF1-207ENST00000573867 RTN1Q16799 776 aa32.11■■■□□ 2.73
SCARF1-207ENST00000573867 RMDN3Q96TC7 470 aa32.11■■■□□ 2.73
SCARF1-207ENST00000573867 ZSWIM6Q9HCJ5 1215 aa32.11■■■□□ 2.73
SCARF1-207ENST00000573867 RBM47A0AV96 593 aaKnown RBP32.1■■■□□ 2.73
SCARF1-207ENST00000573867 GOLGA8AA7E2F4 631 aa32.1■■■□□ 2.73
SCARF1-207ENST00000573867 GOLGA8BA8MQT2 603 aa32.1■■■□□ 2.73
SCARF1-207ENST00000573867 PSMA5P28066 241 aa32.1■■■□□ 2.73
SCARF1-207ENST00000573867 CDC27P30260 824 aa32.1■■■□□ 2.73
SCARF1-207ENST00000573867 IQSEC1Q6DN90 963 aa32.1■■■□□ 2.73
SCARF1-207ENST00000573867 FBXL16Q8N461 479 aa32.1■■■□□ 2.73
SCARF1-207ENST00000573867 NSUN6Q8TEA1 469 aaKnown RBP32.1■■■□□ 2.73
SCARF1-207ENST00000573867 NR2E3Q9Y5X4 410 aa32.1■■■□□ 2.73
SCARF1-207ENST00000573867 C6orf222P0C671 652 aaPredicted RBP32.09■■■□□ 2.73
SCARF1-207ENST00000573867 EIF2AK2P19525 551 aaKnown RBP32.09■■■□□ 2.73
SCARF1-207ENST00000573867 CST5P28325 142 aaPredicted RBP32.09■■■□□ 2.73
SCARF1-207ENST00000573867 NKX3-2P78367 333 aa32.09■■■□□ 2.73
SCARF1-207ENST00000573867 FGD1P98174 961 aa32.09■■■□□ 2.73
SCARF1-207ENST00000573867 TRAF1Q13077 416 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms