RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 LAMA4Q16363 1823 aa25.92■■□□□ 1.74
SNF8-216ENST00000573795 B4GALT4O60513 344 aa25.91■■□□□ 1.74
SNF8-216ENST00000573795 KIAA1211Q6ZU35 1233 aa25.91■■□□□ 1.74
SNF8-216ENST00000573795 TICAM2Q86XR7 235 aa25.91■■□□□ 1.74
SNF8-216ENST00000573795 TBC1D10CQ8IV04 446 aa25.91■■□□□ 1.74
SNF8-216ENST00000573795 TRPV6Q9H1D0 765 aa25.91■■□□□ 1.74
SNF8-216ENST00000573795 HIPK3Q9H422 1215 aa25.91■■□□□ 1.74
SNF8-216ENST00000573795 CXXC1Q9P0U4 656 aaPredicted RBP25.91■■□□□ 1.74
SNF8-216ENST00000573795 CCDC171Q6TFL3 1326 aa25.9■■□□□ 1.74
SNF8-216ENST00000573795 SNHG28P0DPA3 235 aa25.9■■□□□ 1.74
SNF8-216ENST00000573795 DUSP28Q4G0W2 176 aa25.9■■□□□ 1.74
SNF8-216ENST00000573795 HERVK_113Q902F9 699 aa25.9■■□□□ 1.74
SNF8-216ENST00000573795 VWCEQ96DN2 955 aa25.9■■□□□ 1.74
SNF8-216ENST00000573795 NOC4LQ9BVI4 516 aaKnown RBP25.9■■□□□ 1.74
SNF8-216ENST00000573795 WNT8AQ9H1J5 351 aa25.9■■□□□ 1.74
SNF8-216ENST00000573795 RBM47A0AV96 593 aaKnown RBP25.89■■□□□ 1.74
SNF8-216ENST00000573795 ZEB2O60315 1214 aa25.89■■□□□ 1.74
SNF8-216ENST00000573795 ZNF543Q08ER8 600 aa25.89■■□□□ 1.74
SNF8-216ENST00000573795 LNPKQ9C0E8 428 aa25.89■■□□□ 1.74
SNF8-216ENST00000573795 ADD3Q9UEY8 706 aaKnown RBP25.89■■□□□ 1.74
SNF8-216ENST00000573795 MUC3AQ02505 3323 aa25.89■■□□□ 1.73
SNF8-216ENST00000573795 TTC28Q96AY4 2481 aa25.89■■□□□ 1.73
SNF8-216ENST00000573795 LOC102724159A0A0B4J2E5 919 aa25.88■■□□□ 1.73
SNF8-216ENST00000573795 PWP2Q15269 919 aaKnown RBP25.88■■□□□ 1.73
SNF8-216ENST00000573795 AKNAD1Q5T1N1 836 aa25.88■■□□□ 1.73
SNF8-216ENST00000573795 SEZ6LQ9BYH1 1024 aa25.88■■□□□ 1.73
SNF8-216ENST00000573795 SCN10AQ9Y5Y9 1956 aa25.87■■□□□ 1.73
SNF8-216ENST00000573795 PTPDC1A2A3K4 754 aa25.87■■□□□ 1.73
SNF8-216ENST00000573795 CCL23P55773 120 aa25.87■■□□□ 1.73
SNF8-216ENST00000573795 WDR11Q9BZH6 1224 aa25.87■■□□□ 1.73
SNF8-216ENST00000573795 NEDD4P46934 1319 aa25.87■■□□□ 1.73
SNF8-216ENST00000573795 MYO9BQ13459 2157 aa25.86■■□□□ 1.73
SNF8-216ENST00000573795 EDNRBP24530 442 aa25.86■■□□□ 1.73
SNF8-216ENST00000573795 CALML3P27482 149 aa25.86■■□□□ 1.73
SNF8-216ENST00000573795 TTC14Q96N46 770 aa25.86■■□□□ 1.73
SNF8-216ENST00000573795 ALDH8A1Q9H2A2 487 aaPredicted RBP25.86■■□□□ 1.73
SNF8-216ENST00000573795 WDR19Q8NEZ3 1342 aa25.86■■□□□ 1.73
SNF8-216ENST00000573795 TRIM6-TRIM34B2RNG4 842 aa25.85■■□□□ 1.73
SNF8-216ENST00000573795 PCP11498 1178 aaKnown RBP25.85■■□□□ 1.73
SNF8-216ENST00000573795 RPS6P62753 249 aaKnown RBP25.85■■□□□ 1.73
SNF8-216ENST00000573795 PURAQ00577 322 aaKnown RBP25.85■■□□□ 1.73
SNF8-216ENST00000573795 RNF207Q6ZRF8 634 aa25.85■■□□□ 1.73
SNF8-216ENST00000573795 MFSD6Q6ZSS7 791 aa25.85■■□□□ 1.73
SNF8-216ENST00000573795 SMC5Q8IY18 1101 aa25.85■■□□□ 1.73
SNF8-216ENST00000573795 FGBP02675 491 aa25.84■■□□□ 1.73
SNF8-216ENST00000573795 SCN5AQ14524 2016 aa25.84■■□□□ 1.73
SNF8-216ENST00000573795 RILPL2Q969X0 211 aa25.84■■□□□ 1.73
SNF8-216ENST00000573795 CPVLQ9H3G5 476 aa25.84■■□□□ 1.73
SNF8-216ENST00000573795 PRDM12Q9H4Q4 367 aa25.84■■□□□ 1.73
SNF8-216ENST00000573795 TRMT13Q9NUP7 481 aaKnown RBP25.84■■□□□ 1.73
SNF8-216ENST00000573795 REV3LO60673 3130 aa25.83■■□□□ 1.73
SNF8-216ENST00000573795 SDSP20132 328 aa25.83■■□□□ 1.73
SNF8-216ENST00000573795 OTOP2Q7RTS6 562 aa25.83■■□□□ 1.73
SNF8-216ENST00000573795 SCLYQ96I15 445 aa25.83■■□□□ 1.73
SNF8-216ENST00000573795 ZKSCAN3Q9BRR0 538 aa25.83■■□□□ 1.73
SNF8-216ENST00000573795 POLR3EQ9NVU0 708 aa25.83■■□□□ 1.73
SNF8-216ENST00000573795 YBX2Q9Y2T7 364 aaKnown RBP25.83■■□□□ 1.73
SNF8-216ENST00000573795 GOLGA8HP0CJ92 632 aa25.82■■□□□ 1.72
SNF8-216ENST00000573795 ADGRE1Q14246 886 aa25.82■■□□□ 1.72
SNF8-216ENST00000573795 OR6J1Q8NGC5 347 aa25.82■■□□□ 1.72
SNF8-216ENST00000573795 PRDM6Q9NQX0 595 aa25.82■■□□□ 1.72
SNF8-216ENST00000573795 PNMA2Q9UL42 364 aa25.82■■□□□ 1.72
SNF8-216ENST00000573795 TANC1Q9C0D5 1861 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 MYL3P08590 195 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 CYP2C9P11712 490 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 CPT1AP50416 773 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 RAB30Q15771 203 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 B4GALNT3Q6L9W6 998 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 PLEKHM2Q8IWE5 1019 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 COPS5Q92905 334 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 NKX2-4Q9H2Z4 354 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 RNF41Q9H4P4 317 aaPredicted RBP25.81■■□□□ 1.72
SNF8-216ENST00000573795 TNKSO95271 1327 aa25.81■■□□□ 1.72
SNF8-216ENST00000573795 PDE4DQ08499 809 aa25.8■■□□□ 1.72
SNF8-216ENST00000573795 DNERQ8NFT8 737 aa25.8■■□□□ 1.72
SNF8-216ENST00000573795 PPP1R13LQ8WUF5 828 aa25.8■■□□□ 1.72
SNF8-216ENST00000573795 ESR2Q92731 530 aa25.8■■□□□ 1.72
SNF8-216ENST00000573795 MTG1Q9BT17 334 aaPredicted RBP25.8■■□□□ 1.72
SNF8-216ENST00000573795 UBA5Q9GZZ9 404 aa25.8■■□□□ 1.72
SNF8-216ENST00000573795 MTIF3Q9H2K0 278 aaKnown RBP25.8■■□□□ 1.72
SNF8-216ENST00000573795 OSBPL3Q9H4L5 887 aa25.8■■□□□ 1.72
SNF8-216ENST00000573795 MSRAQ9UJ68 235 aa25.8■■□□□ 1.72
SNF8-216ENST00000573795 ARIH2O95376 493 aa25.79■■□□□ 1.72
SNF8-216ENST00000573795 PPP2R5BQ15173 497 aa25.79■■□□□ 1.72
SNF8-216ENST00000573795 USH1GQ495M9 461 aa25.79■■□□□ 1.72
SNF8-216ENST00000573795 GPATCH4Q5T3I0 446 aaKnown RBP25.79■■□□□ 1.72
SNF8-216ENST00000573795 DGKHQ86XP1 1220 aa25.79■■□□□ 1.72
SNF8-216ENST00000573795 GAS2L1Q99501 681 aaPredicted RBP25.79■■□□□ 1.72
SNF8-216ENST00000573795 TRANK1O15050 2925 aa25.79■■□□□ 1.72
SNF8-216ENST00000573795 A6NJR5 290 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 NKRFO15226 690 aaKnown RBP eCLIP25.78■■□□□ 1.72
SNF8-216ENST00000573795 IGHDP01880 384 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 RABGGTBP53611 331 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 NBPF20Q3BBV1 942 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 CHD1LQ86WJ1 897 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 RGS22Q8NE09 1264 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 SCFD2Q8WU76 684 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 TBC1D5Q92609 795 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 MYH6P13533 1939 aa25.78■■□□□ 1.72
SNF8-216ENST00000573795 KIAA1217Q5T5P2 1943 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms