RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 FSCN1Q16658 493 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 IQSEC1Q6DN90 963 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 CCSAPQ6IQ19 270 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 Q7L0L9 218 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 ADGRF4Q8IZF3 695 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 CLEC4DQ8WXI8 215 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 TOX2Q96NM4 488 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 VAT1LQ9HCJ6 419 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 ABCB11O95342 1321 aa11.27□□□□□ -0.61
NPLOC4-212ENST00000573328 GBF1Q92538 1859 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 ARVCFO00192 962 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 PTGS1P23219 599 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 PTH1RQ03431 593 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 FPGSQ05932 587 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 FAAP100Q0VG06 881 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 SHHQ15465 462 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 C9orf50Q5SZB4 431 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 GPR153Q6NV75 609 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 TAPT1Q6NXT6 567 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 CYB5R4Q7L1T6 521 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 ANKRD33Q7Z3H0 272 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-212ENST00000573328 IFIT3O14879 490 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 CABYRO75952 493 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 CYP21A2P08686 494 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 ITGB8P26012 769 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 DUSP28Q4G0W2 176 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 FBXO11Q86XK2 927 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 NCOA7Q8NI08 942 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 MORC4Q8TE76 937 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 ANKS1AQ92625 1134 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 PPP1R12CQ9BZL4 782 aa11.25□□□□□ -0.61
NPLOC4-212ENST00000573328 COL6A3P12111 3177 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 TANC1Q9C0D5 1861 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 E7EWF7 191 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 CTAGE5O15320 804 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 SGSM2O43147 1006 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 MYL3P08590 195 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 CPT1AP50416 773 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 ITGA7Q13683 1181 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 WTAPQ15007 396 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 BRDTQ58F21 947 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 TMEM63BQ5T3F8 832 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 STAG2Q8N3U4 1231 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 FAM161BQ96MY7 647 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 JMJD4Q9H9V9 463 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 Q9Y3F1 56 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
NPLOC4-212ENST00000573328 DOCK5Q9H7D0 1870 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 TRIP12Q14669 1992 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 KLRF2D3W0D1 207 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 CFBP00751 764 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 TIMP1P01033 207 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 PSMC6P62333 389 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.617e-7■■□□□ 12.5
NPLOC4-212ENST00000573328 SEC23AQ15436 765 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 FAM126BQ8IXS8 530 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 SCFD2Q8WU76 684 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 AMNQ9BXJ7 453 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 TBX21Q9UL17 535 aa11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 RBM8AQ9Y5S9 174 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-212ENST00000573328 NKRFO15226 690 aaKnown RBP eCLIP11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 TXNP10599 105 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 EIF2AK2P19525 551 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 CDK7P50613 346 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 CHMP4BP1P59074 171 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 NKX3-2P78367 333 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 TTLL4Q14679 1199 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 MFSD5Q6N075 450 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 CATIPQ7Z7H3 387 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 TBC1D5Q92609 795 aa11.22□□□□□ -0.61
NPLOC4-212ENST00000573328 TAAR1Q96RJ0 339 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms