RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 FANCBQ8NB91 859 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 KATNBL1Q9H079 304 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 TNRC18O15417 2968 aaPredicted RBP23.96■■□□□ 1.43
CHMP6-204ENST00000572778 KBTBD13C9JR72 458 aa23.96■■□□□ 1.43
CHMP6-204ENST00000572778 PGK1P00558 417 aa23.96■■□□□ 1.43
CHMP6-204ENST00000572778 CFBP00751 764 aa23.96■■□□□ 1.43
CHMP6-204ENST00000572778 APOA5Q6Q788 366 aa23.96■■□□□ 1.43
CHMP6-204ENST00000572778 RRP36Q96EU6 259 aaKnown RBP23.96■■□□□ 1.43
CHMP6-204ENST00000572778 SPZ1Q9BXG8 430 aa23.96■■□□□ 1.43
CHMP6-204ENST00000572778 MAF1Q9H063 256 aa23.96■■□□□ 1.43
CHMP6-204ENST00000572778 BRPF3Q9ULD4 1205 aa23.96■■□□□ 1.43
CHMP6-204ENST00000572778 NAP1L2Q9ULW6 460 aaPredicted RBP23.96■■□□□ 1.43
CHMP6-204ENST00000572778 KLF18A0A0U1RQI7 1052 aa23.95■■□□□ 1.42
CHMP6-204ENST00000572778 COL6A1P12109 1028 aa23.95■■□□□ 1.42
CHMP6-204ENST00000572778 SMARCA1P28370 1054 aa23.95■■□□□ 1.42
CHMP6-204ENST00000572778 LRRC41Q15345 812 aa23.95■■□□□ 1.42
CHMP6-204ENST00000572778 Q6ZUG5 572 aa23.95■■□□□ 1.42
CHMP6-204ENST00000572778 CCDC82Q8N4S0 544 aa23.95■■□□□ 1.42
CHMP6-204ENST00000572778 SRBD1Q8N5C6 995 aaKnown RBP23.95■■□□□ 1.42
CHMP6-204ENST00000572778 DNERQ8NFT8 737 aa23.95■■□□□ 1.42
CHMP6-204ENST00000572778 SYTL5Q8TDW5 730 aaPredicted RBP23.95■■□□□ 1.42
CHMP6-204ENST00000572778 MPHOSPH6Q99547 160 aaKnown RBP23.95■■□□□ 1.42
CHMP6-204ENST00000572778 SENP6Q9GZR1 1112 aaPredicted RBP23.95■■□□□ 1.42
CHMP6-204ENST00000572778 ZBTB43O43298 467 aa23.94■■□□□ 1.42
CHMP6-204ENST00000572778 EVI5O60447 810 aa23.94■■□□□ 1.42
CHMP6-204ENST00000572778 CASTP20810 708 aaKnown RBP23.94■■□□□ 1.42
CHMP6-204ENST00000572778 RPS6KB1P23443 525 aa23.94■■□□□ 1.42
CHMP6-204ENST00000572778 PDE4DQ08499 809 aa23.94■■□□□ 1.42
CHMP6-204ENST00000572778 PRPF38BQ5VTL8 546 aaKnown RBP23.94■■□□□ 1.42
CHMP6-204ENST00000572778 NOL8Q76FK4 1167 aaKnown RBP23.94■■□□□ 1.42
CHMP6-204ENST00000572778 RNF180Q86T96 592 aa23.94■■□□□ 1.42
CHMP6-204ENST00000572778 FBXO16Q8IX29 292 aaPredicted RBP23.94■■□□□ 1.42
CHMP6-204ENST00000572778 MORC4Q8TE76 937 aa23.94■■□□□ 1.42
CHMP6-204ENST00000572778 TAAR1Q96RJ0 339 aa23.94■■□□□ 1.42
CHMP6-204ENST00000572778 SEC63Q9UGP8 760 aaKnown RBP23.94■■□□□ 1.42
CHMP6-204ENST00000572778 SMCHD1A6NHR9 2005 aa23.93■■□□□ 1.42
CHMP6-204ENST00000572778 LOC102724159A0A0B4J2E5 919 aa23.93■■□□□ 1.42
CHMP6-204ENST00000572778 DUSP11O75319 330 aaKnown RBP23.93■■□□□ 1.42
CHMP6-204ENST00000572778 ADCYAP1R1P41586 468 aa23.93■■□□□ 1.42
CHMP6-204ENST00000572778 PWP2Q15269 919 aaKnown RBP23.93■■□□□ 1.42
CHMP6-204ENST00000572778 VTA1Q9NP79 307 aa23.93■■□□□ 1.42
CHMP6-204ENST00000572778 PDGFCQ9NRA1 345 aa23.93■■□□□ 1.42
CHMP6-204ENST00000572778 COL20A1Q9P218 1284 aa23.93■■□□□ 1.42
CHMP6-204ENST00000572778 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.92■■□□□ 1.42
CHMP6-204ENST00000572778 B4DLN1 442 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 OPLAHO14841 1288 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 ADCY6O43306 1168 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 MRPL12P52815 198 aaKnown RBP23.92■■□□□ 1.42
CHMP6-204ENST00000572778 TNFAIP2Q03169 654 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 APOBRQ0VD83 1088 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 TMTC3Q6ZXV5 915 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 BRF1Q92994 677 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 RBM28Q9NW13 759 aaKnown RBP23.92■■□□□ 1.42
CHMP6-204ENST00000572778 NR2E3Q9Y5X4 410 aa23.92■■□□□ 1.42
CHMP6-204ENST00000572778 SYNRGQ9UMZ2 1314 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 GOLGA8AA7E2F4 631 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 GOLGA8BA8MQT2 603 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 HSD17B4P51659 736 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 RTN1Q16799 776 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 TAPT1Q6NXT6 567 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 NSUN6Q8TEA1 469 aaKnown RBP23.91■■□□□ 1.42
CHMP6-204ENST00000572778 RMDN3Q96TC7 470 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 SPC25Q9HBM1 224 aa23.91■■□□□ 1.42
CHMP6-204ENST00000572778 hCG_1642624A0A1W2PR95 340 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 GCOM1H8Y6P7 765 aaPredicted RBP23.9■■□□□ 1.42
CHMP6-204ENST00000572778 ADAMTS4O75173 837 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 POLR2MP0CAP2 368 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 EDNRBP24530 442 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 HOXA13P31271 388 aaPredicted RBP23.9■■□□□ 1.42
CHMP6-204ENST00000572778 ATN1P54259 1190 aaPredicted RBP23.9■■□□□ 1.42
CHMP6-204ENST00000572778 ARHGEF16Q5VV41 709 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 IQSEC1Q6DN90 963 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 FERMT2Q96AC1 680 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 ZSWIM6Q9HCJ5 1215 aa23.9■■□□□ 1.42
CHMP6-204ENST00000572778 H0YGN5 161 aa23.89■■□□□ 1.41
CHMP6-204ENST00000572778 C6orf222P0C671 652 aaPredicted RBP23.89■■□□□ 1.41
CHMP6-204ENST00000572778 LRRC26Q2I0M4 334 aa23.89■■□□□ 1.41
CHMP6-204ENST00000572778 RUFY3Q7L099 469 aa23.89■■□□□ 1.41
CHMP6-204ENST00000572778 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.41
CHMP6-204ENST00000572778 MAP3K20Q9NYL2 800 aaKnown RBP23.89■■□□□ 1.41
CHMP6-204ENST00000572778 CYP46A1Q9Y6A2 500 aa23.89■■□□□ 1.41
CHMP6-204ENST00000572778 MYADML2A6NDP7 307 aa23.88■■□□□ 1.41
CHMP6-204ENST00000572778 SMPD1P17405 629 aa23.88■■□□□ 1.41
CHMP6-204ENST00000572778 EIF2AK2P19525 551 aaKnown RBP23.88■■□□□ 1.41
CHMP6-204ENST00000572778 METAP2P50579 478 aaKnown RBP eCLIP23.88■■□□□ 1.41
CHMP6-204ENST00000572778 IRX5P78411 483 aaPredicted RBP23.88■■□□□ 1.41
CHMP6-204ENST00000572778 GHRHRQ02643 423 aa23.88■■□□□ 1.41
CHMP6-204ENST00000572778 SAMD3Q8N6K7 520 aa23.88■■□□□ 1.41
CHMP6-204ENST00000572778 FRMPD3Q5JV73 1810 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 EIF5BO60841 1220 aaKnown RBP23.87■■□□□ 1.41
CHMP6-204ENST00000572778 RCAN1P53805 252 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 GJA9P57773 515 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 TMEM63BQ5T3F8 832 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 FCHSD1Q86WN1 690 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 FBXL16Q8N461 479 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 KLHDC9Q8NEP7 349 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 IWS1Q96ST2 819 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 WDR11Q9BZH6 1224 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 UPF3BQ9BZI7 483 aaKnown RBP23.87■■□□□ 1.41
CHMP6-204ENST00000572778 TM6SF1Q9BZW5 370 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms