RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
CHMP6-203ENST00000572525 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
CHMP6-203ENST00000572525 TGS1Q96RS0 853 aaKnown RBP12.12□□□□□ -0.47
CHMP6-203ENST00000572525 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHMP6-203ENST00000572525 FAM50BQ9Y247 325 aa12.12□□□□□ -0.47
CHMP6-203ENST00000572525 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
CHMP6-203ENST00000572525 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
CHMP6-203ENST00000572525 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
CHMP6-203ENST00000572525 FAM186AA6NE01 2351 aa12.12□□□□□ -0.47
CHMP6-203ENST00000572525 ZFHX2Q9C0A1 2572 aaPredicted RBP12.12□□□□□ -0.47
CHMP6-203ENST00000572525 WDR87Q6ZQQ6 2873 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 CYP2D7A0A087X1C5 515 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
CHMP6-203ENST00000572525 PRKAB2O43741 272 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 SSTR3P32745 418 aaPredicted RBP12.11□□□□□ -0.47
CHMP6-203ENST00000572525 FOXK2Q01167 660 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 RBL2Q08999 1139 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 COL19A1Q14993 1142 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 BRDTQ58F21 947 aaPredicted RBP12.11□□□□□ -0.47
CHMP6-203ENST00000572525 PTCRAQ6ISU1 281 aaPredicted RBP12.11□□□□□ -0.47
CHMP6-203ENST00000572525 TMEM57Q8N5G2 664 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 AFAP1L1Q8TED9 768 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 RAD9AQ99638 391 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
CHMP6-203ENST00000572525 SUGCTQ9HAC7 445 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 RNF146Q9NTX7 359 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 RAD50Q92878 1312 aa12.11□□□□□ -0.47
CHMP6-203ENST00000572525 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 C19orf67A6NJJ6 358 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 GOLIM4O00461 696 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 NKRFO15226 690 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHMP6-203ENST00000572525 ST18O60284 1047 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 GJB5O95377 273 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 IL9P15248 144 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 WDR5P61964 334 aaKnown RBP12.1□□□□□ -0.47
CHMP6-203ENST00000572525 FAM160B2Q86V87 743 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 GDPD5Q8WTR4 605 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 MFSD14AQ96MC6 490 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
CHMP6-203ENST00000572525 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 PRRX2Q99811 253 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 FTOQ9C0B1 505 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHMP6-203ENST00000572525 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
CHMP6-203ENST00000572525 ABHD14A-ACY1A0A1B0GW23 586 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 CXCL10P02778 98 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 BMP3P12645 472 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 KCNA5P22460 613 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 STAT2P52630 851 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 PKN1Q16512 942 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
CHMP6-203ENST00000572525 CLASRPQ8N2M8 674 aaKnown RBP12.09□□□□□ -0.47
CHMP6-203ENST00000572525 CLUAP1Q96AJ1 413 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 GMCL1Q96IK5 515 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
CHMP6-203ENST00000572525 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
CHMP6-203ENST00000572525 PAG1Q9NWQ8 432 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 MTMR4Q9NYA4 1195 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 ADD3Q9UEY8 706 aaKnown RBP12.09□□□□□ -0.47
CHMP6-203ENST00000572525 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
CHMP6-203ENST00000572525 MYH6P13533 1939 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 LCHNA4D1U4 455 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 LINC01553A4QN01 128 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 A6NJR5 290 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 TTLL1O95922 423 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 ZP2Q05996 745 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 TIGD5Q53EQ6 642 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 CNKSR3Q6P9H4 555 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 BMP8AQ7Z5Y6 402 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 SPRED2Q7Z698 418 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 MRPL38Q96DV4 380 aaKnown RBP12.08□□□□□ -0.48
CHMP6-203ENST00000572525 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 SAMD11Q96NU1 681 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 TRERF1Q96PN7 1200 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 DNAJC2Q99543 621 aaKnown RBP12.08□□□□□ -0.48
CHMP6-203ENST00000572525 MKNK2Q9HBH9 465 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
CHMP6-203ENST00000572525 VPS13AQ96RL7 3174 aa12.07□□□□□ -0.48
CHMP6-203ENST00000572525 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
CHMP6-203ENST00000572525 ADHFE1Q8IWW8 467 aa12.07□□□□□ -0.48
CHMP6-203ENST00000572525 STAG1Q8WVM7 1258 aa12.07□□□□□ -0.48
CHMP6-203ENST00000572525 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
CHMP6-203ENST00000572525 PABPC5Q96DU9 382 aaKnown RBP12.07□□□□□ -0.48
CHMP6-203ENST00000572525 POP1Q99575 1024 aaKnown RBP12.07□□□□□ -0.48
CHMP6-203ENST00000572525 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms