RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SH2B2O14492 632 aaPredicted RBP9.04□□□□□ -0.96
SMG6-211ENST00000572369 CALM1P0DP23 149 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 CALM2P0DP24 149 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 CALM3P0DP25 149 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 BMP1P13497 986 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 KIF5BP33176 963 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 GRM4Q14833 912 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 CDC37Q16543 378 aaPredicted RBP9.04□□□□□ -0.96
SMG6-211ENST00000572369 ZNF792Q3KQV3 632 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 ADCK5Q3MIX3 580 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 MUM1L1Q5H9M0 696 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 OLFML2BQ68BL8 750 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 BLOC1S2Q6QNY1 142 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 DHX32Q7L7V1 743 aaKnown RBP9.04□□□□□ -0.96
SMG6-211ENST00000572369 FBXO11Q86XK2 927 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 HOMER1Q86YM7 354 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 CCDC144CPQ8IYA2 1237 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 TCEANC2Q96MN5 208 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 LBHD1Q9BQE6 289 aaPredicted RBP9.04□□□□□ -0.96
SMG6-211ENST00000572369 MYL10Q9BUA6 226 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
SMG6-211ENST00000572369 MAD2L2Q9UI95 211 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 CNPY2Q9Y2B0 182 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 SNX14Q9Y5W7 946 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 SLC12A7Q9Y666 1083 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 CHD8Q9HCK8 2581 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 SMCHD1A6NHR9 2005 aa9.04□□□□□ -0.96
SMG6-211ENST00000572369 PRR33A8MZF0 331 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 EPB41L2O43491 1005 aaKnown RBP9.03□□□□□ -0.96
SMG6-211ENST00000572369 DDAH1O94760 285 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
SMG6-211ENST00000572369 RXRAP19793 462 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 CASTP20810 708 aaKnown RBP9.03□□□□□ -0.96
SMG6-211ENST00000572369 CALML3P27482 149 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 CCND3P30281 292 aaPredicted RBP9.03□□□□□ -0.96
SMG6-211ENST00000572369 LIFRP42702 1097 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 TRAF1Q13077 416 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 QRICH1Q2TAL8 776 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 RAB11FIP4Q86YS3 637 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 PIBF1Q8WXW3 757 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 FBXL18Q96ME1 805 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 TINF2Q9BSI4 451 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 JMJD4Q9H9V9 463 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 A1CFQ9NQ94 594 aaKnown RBP9.03□□□□□ -0.96
SMG6-211ENST00000572369 DIS3Q9Y2L1 958 aaKnown RBP9.03□□□□□ -0.96
SMG6-211ENST00000572369 FRMPD3Q5JV73 1810 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 ABCB11O95342 1321 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 WDR19Q8NEZ3 1342 aa9.03□□□□□ -0.96
SMG6-211ENST00000572369 TCF20Q9UGU0 1960 aaKnown RBP9.03□□□□□ -0.96
SMG6-211ENST00000572369 PALM3A6NDB9 673 aaPredicted RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 ZBTB5O15062 677 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 MSCO60682 206 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 MYCNP04198 464 aaPredicted RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 CPA1P15085 419 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 GNAQP50148 359 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 CNTN2Q02246 1040 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 TROAPQ12815 778 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 BAATQ14032 418 aaPredicted RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 SHHQ15465 462 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 PRAMEF19Q5SWL8 479 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 MAP3K21Q5TCX8 1036 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 RNF207Q6ZRF8 634 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 Q6ZUG5 572 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 MICU3Q86XE3 530 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 PIGSQ96S52 555 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 MPHOSPH6Q99547 160 aaKnown RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 MAP3K14Q99558 947 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 LZTS2Q9BRK4 669 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 AMNQ9BXJ7 453 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 USP26Q9BXU7 913 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 KCNH6Q9H252 994 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 ADD3Q9UEY8 706 aaKnown RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 SEC63Q9UGP8 760 aaKnown RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 ZHX1Q9UKY1 873 aaPredicted RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 MRPL11Q9Y3B7 192 aaKnown RBP9.02□□□□□ -0.97
SMG6-211ENST00000572369 MCM3APO60318 1980 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 SPTBN4Q9H254 2564 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 EPG5Q9HCE0 2579 aa9.02□□□□□ -0.97
SMG6-211ENST00000572369 DNAJC25-GNG10A0A024R161 153 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 KLF18A0A0U1RQI7 1052 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 ASB14A6NK59 587 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 GOLGA8AA7E2F4 631 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 GOLGA8BA8MQT2 603 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 NFIBO00712 420 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 ZBTB43O43298 467 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 RGS20O76081 388 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 CFBP00751 764 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 CYBAP13498 195 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 EXOSC10Q01780 885 aaKnown RBP9.01□□□□□ -0.97
SMG6-211ENST00000572369 COL9A3Q14050 684 aaPredicted RBP9.01□□□□□ -0.97
SMG6-211ENST00000572369 C9orf50Q5SZB4 431 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 ANO1Q5XXA6 986 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMG6-211ENST00000572369 ARMCX2Q7L311 632 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 MCF2L2Q86YR7 1114 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 CCDC82Q8N4S0 544 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms