RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 TROAPQ12815 778 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 SNX17Q15036 470 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 SLC35G1Q2M3R5 365 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 CCSAPQ6IQ19 270 aaPredicted RBP20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 NFXL1Q6ZNB6 911 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 TLK2Q86UE8 772 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 MORC4Q8TE76 937 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 PIBF1Q8WXW3 757 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 VTI1AQ96AJ9 217 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 TSEN34Q9BSV6 310 aaKnown RBP20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 UBE2OQ9C0C9 1292 aaKnown RBP20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 UPF3AQ9H1J1 476 aaKnown RBP20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 LY9Q9HBG7 655 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 VTA1Q9NP79 307 aa20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 MRPL11Q9Y3B7 192 aaKnown RBP20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 MOXD2PA6NHM9 499 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 PPP1R11O60927 126 aaPredicted RBP20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 ASGR1P07306 291 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 MCM5P33992 734 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 TLE2Q04725 743 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 PDE4DQ08499 809 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 PIGSQ96S52 555 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 AMNQ9BXJ7 453 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 AP5M1Q9H0R1 490 aa20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 GNEQ9Y223 722 aaKnown RBP20.68■□□□□ 0.9
CTDNEP1-207ENST00000572043 ZBTB5O15062 677 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 CTAGE5O15320 804 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 CST5P28325 142 aaPredicted RBP20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 IQSEC1Q6DN90 963 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 SH3RF1Q7Z6J0 888 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 MCF2L2Q86YR7 1114 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 RAB11FIP4Q86YS3 637 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 ZNF654Q8IZM8 581 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 PCSK9Q8NBP7 692 aaKnown RBP20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 SYTL5Q8TDW5 730 aaPredicted RBP20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 GLT1D1Q96MS3 346 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 TAAR1Q96RJ0 339 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 LBHD1Q9BQE6 289 aaPredicted RBP20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 COL20A1Q9P218 1284 aa20.67■□□□□ 0.9
CTDNEP1-207ENST00000572043 CCDC69A6NI79 296 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 SH2B2O14492 632 aaPredicted RBP20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 CYTH3O43739 400 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 CFBP00751 764 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 RXRAP19793 462 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 RGS22Q8NE09 1264 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 DNERQ8NFT8 737 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 MTMR8Q96EF0 704 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 MPHOSPH6Q99547 160 aaKnown RBP20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 WDR11Q9BZH6 1224 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 PDLIM7Q9NR12 457 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 PCDHA1Q9Y5I3 950 aa20.66■□□□□ 0.9
CTDNEP1-207ENST00000572043 BMP8BP34820 402 aa20.65■□□□□ 0.9
CTDNEP1-207ENST00000572043 FSCN1Q16658 493 aaKnown RBP20.65■□□□□ 0.9
CTDNEP1-207ENST00000572043 RNF20Q5VTR2 975 aa20.65■□□□□ 0.9
CTDNEP1-207ENST00000572043 C1orf53Q5VUE5 145 aa20.65■□□□□ 0.9
CTDNEP1-207ENST00000572043 CXCL17Q6UXB2 119 aa20.65■□□□□ 0.9
CTDNEP1-207ENST00000572043 CTCFLQ8NI51 663 aaPredicted RBP20.65■□□□□ 0.9
CTDNEP1-207ENST00000572043 RIOX1Q9H6W3 641 aa20.65■□□□□ 0.9
CTDNEP1-207ENST00000572043 TRIM43BA6NCK2 446 aa20.64■□□□□ 0.89
CTDNEP1-207ENST00000572043 EIF2AK2P19525 551 aaKnown RBP20.64■□□□□ 0.89
CTDNEP1-207ENST00000572043 EDNRBP24530 442 aa20.64■□□□□ 0.89
CTDNEP1-207ENST00000572043 TRIM43Q96BQ3 446 aaPredicted RBP20.64■□□□□ 0.89
CTDNEP1-207ENST00000572043 TMEM87BQ96K49 555 aa20.64■□□□□ 0.89
CTDNEP1-207ENST00000572043 TCEANC2Q96MN5 208 aa20.64■□□□□ 0.89
CTDNEP1-207ENST00000572043 LOC102724159A0A0B4J2E5 919 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 B4DLN1 442 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 OPLAHO14841 1288 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 DDAH1O94760 285 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 CLTBP09497 229 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 HOXA13P31271 388 aaPredicted RBP20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 MRPL12P52815 198 aaKnown RBP20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 PWP2Q15269 919 aaKnown RBP20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 DUSP28Q4G0W2 176 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 RASEFQ8IZ41 740 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 CMTR1Q8N1G2 835 aaKnown RBP20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 BADQ92934 168 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 NEK1Q96PY6 1258 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 RMDN3Q96TC7 470 aa20.63■□□□□ 0.89
CTDNEP1-207ENST00000572043 LRRC37A2A6NM11 1700 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 ELP1O95163 1332 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 SMCHD1A6NHR9 2005 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 A0A1W2PPC1 479 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 SOX1O00570 391 aaPredicted RBP20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 KIF5BP33176 963 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 PPP2R5BQ15173 497 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 ADCK5Q3MIX3 580 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 SEPT14Q6ZU15 432 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 TDHQ8IZJ6 230 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 OR6J1Q8NGC5 347 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 NSUN6Q8TEA1 469 aaKnown RBP20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 COPS5Q92905 334 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 TMEM39AQ9NV64 488 aa20.62■□□□□ 0.89
CTDNEP1-207ENST00000572043 LCTP09848 1927 aa20.61■□□□□ 0.89
CTDNEP1-207ENST00000572043 PNMA6FA0A0J9YX94 578 aa20.61■□□□□ 0.89
CTDNEP1-207ENST00000572043 A0A0U1RQG5 324 aaPredicted RBP20.61■□□□□ 0.89
CTDNEP1-207ENST00000572043 DCDC2CA8MYV0 355 aa20.61■□□□□ 0.89
CTDNEP1-207ENST00000572043 ZEB2O60315 1214 aa20.61■□□□□ 0.89
CTDNEP1-207ENST00000572043 PLEKHA8P1O95397 391 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms