RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 PTPDC1A2A3K4 754 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 NKRFO15226 690 aaKnown RBP eCLIP18.28■□□□□ 0.52
TSR1-202ENST00000571806 PDHBP11177 359 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 SLC16A2P36021 539 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 TTBK2Q6IQ55 1244 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 WDR11Q9BZH6 1224 aa18.28■□□□□ 0.52
TSR1-202ENST00000571806 CUL9Q8IWT3 2517 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 GRIN2DO15399 1336 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 RAD50Q92878 1312 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 A0A0D9SFI3 127 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 B4GALT4O60513 344 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 PFKMP08237 780 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 ACRP10323 421 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 GPATCH4Q5T3I0 446 aaKnown RBP18.27■□□□□ 0.52
TSR1-202ENST00000571806 RNF207Q6ZRF8 634 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 GPCPD1Q9NPB8 672 aa18.27■□□□□ 0.52
TSR1-202ENST00000571806 GPHNQ9NQX3 736 aaPredicted RBP18.27■□□□□ 0.52
TSR1-202ENST00000571806 CCDC171Q6TFL3 1326 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 TRIM6-TRIM34B2RNG4 842 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 NFIBO00712 420 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 KPNA6O60684 536 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 SNHG28P0DPA3 235 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 ZNF543Q08ER8 600 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 RGS22Q8NE09 1264 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 ESR2Q92731 530 aa18.26■□□□□ 0.51
TSR1-202ENST00000571806 NOC4LQ9BVI4 516 aaKnown RBP18.26■□□□□ 0.51
TSR1-202ENST00000571806 ALDH8A1Q9H2A2 487 aaPredicted RBP18.26■□□□□ 0.51
TSR1-202ENST00000571806 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
TSR1-202ENST00000571806 PDE4DQ08499 809 aa18.25■□□□□ 0.51
TSR1-202ENST00000571806 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
TSR1-202ENST00000571806 DGKHQ86XP1 1220 aa18.25■□□□□ 0.51
TSR1-202ENST00000571806 CLEC4DQ8WXI8 215 aa18.25■□□□□ 0.51
TSR1-202ENST00000571806 CRBNQ96SW2 442 aa18.25■□□□□ 0.51
TSR1-202ENST00000571806 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
TSR1-202ENST00000571806 LCTP09848 1927 aa18.25■□□□□ 0.51
TSR1-202ENST00000571806 ZNF213O14771 459 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 CALML3P27482 149 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 PBX2P40425 430 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 PSMC6P62333 389 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 RPS6P62753 249 aaKnown RBP18.24■□□□□ 0.51
TSR1-202ENST00000571806 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
TSR1-202ENST00000571806 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
TSR1-202ENST00000571806 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 SCFD2Q8WU76 684 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 RILPL2Q969X0 211 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 PURBQ96QR8 312 aaKnown RBP18.24■□□□□ 0.51
TSR1-202ENST00000571806 MTG1Q9BT17 334 aaPredicted RBP18.24■□□□□ 0.51
TSR1-202ENST00000571806 SLC28A3Q9HAS3 691 aa18.24■□□□□ 0.51
TSR1-202ENST00000571806 DDX49Q9Y6V7 483 aaKnown RBP18.24■□□□□ 0.51
TSR1-202ENST00000571806 VCANP13611 3396 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 GRXCR1A8MXD5 290 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 EDNRBP24530 442 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 CCL23P55773 120 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 HAND2P61296 217 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 PPP2R5BQ15173 497 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 TJAP1Q5JTD0 557 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 OTOP2Q7RTS6 562 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 OR6J1Q8NGC5 347 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
TSR1-202ENST00000571806 SLC4A7Q9Y6M7 1214 aa18.23■□□□□ 0.51
TSR1-202ENST00000571806 PRUNE2Q8WUY3 3088 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 SDSP20132 328 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 PTPN11Q06124 597 aaPredicted RBP18.22■□□□□ 0.51
TSR1-202ENST00000571806 TMEM63BQ5T3F8 832 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 NFRKBQ6P4R8 1299 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 SLC30A10Q6XR72 485 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 ATXN2LQ8WWM7 1075 aaKnown RBP18.22■□□□□ 0.51
TSR1-202ENST00000571806 LNPKQ9C0E8 428 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 WNT8AQ9H1J5 351 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 CXXC1Q9P0U4 656 aaPredicted RBP18.22■□□□□ 0.51
TSR1-202ENST00000571806 TNKSO95271 1327 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 UMODL1Q5DID0 1318 aa18.22■□□□□ 0.51
TSR1-202ENST00000571806 A6NJR5 290 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 HIP1O00291 1037 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 MYL3P08590 195 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 RFC2P35250 354 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 TTLL4Q14679 1199 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 SMC5Q8IY18 1101 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 PRDM12Q9H4Q4 367 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 PCDHA11Q9Y5I1 949 aa18.21■□□□□ 0.51
TSR1-202ENST00000571806 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 TXNP10599 105 aaKnown RBP18.2■□□□□ 0.5
TSR1-202ENST00000571806 ACTN1P12814 892 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 PTGS1P23219 599 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 TBC1D10CQ8IV04 446 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 ANKS1AQ92625 1134 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 KAT14Q9H8E8 782 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 ABCB11O95342 1321 aa18.2■□□□□ 0.5
TSR1-202ENST00000571806 NBPF20Q3BBV1 942 aa18.19■□□□□ 0.5
TSR1-202ENST00000571806 ASPRV1Q53RT3 343 aa18.19■□□□□ 0.5
TSR1-202ENST00000571806 CHD1LQ86WJ1 897 aa18.19■□□□□ 0.5
TSR1-202ENST00000571806 RETREG2Q8NC44 543 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms