RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 MKRN3Q13064 507 aaKnown RBP13.6□□□□□ -0.23
CDRT1-206ENST00000571263 PLS1Q14651 629 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
CDRT1-206ENST00000571263 JAKMIP3Q5VZ66 844 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDRT1-206ENST00000571263 NEK8Q86SG6 692 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 GPRC5AQ8NFJ5 357 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 CLEC4DQ8WXI8 215 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.6□□□□□ -0.23
CDRT1-206ENST00000571263 RNF146Q9NTX7 359 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 RLFQ13129 1914 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 BAZ2BQ9UIF8 2168 aaKnown RBP13.59□□□□□ -0.23
CDRT1-206ENST00000571263 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
CDRT1-206ENST00000571263 B4DLN1 442 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 PPP6R2O75170 966 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 SLC39A14Q15043 492 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 STK38Q15208 465 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 SKOR2Q2VWA4 1001 aaPredicted RBP13.59□□□□□ -0.23
CDRT1-206ENST00000571263 TTC38Q5R3I4 469 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 PPP4R3AQ6IN85 833 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 FAM173BQ6P4H8 233 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 MOXD1Q6UVY6 613 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 RNF207Q6ZRF8 634 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 TBCKQ8TEA7 893 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 USP28Q96RU2 1077 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 TFIP11Q9UBB9 837 aaKnown RBP13.59□□□□□ -0.23
CDRT1-206ENST00000571263 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 MORF4L1Q9UBU8 362 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 PFASO15067 1338 aa13.59□□□□□ -0.23
CDRT1-206ENST00000571263 OPLAHO14841 1288 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 CYP3A4P08684 503 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 TOB1P50616 345 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-206ENST00000571263 INF2Q27J81 1249 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 FOXD4L6Q3SYB3 417 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-206ENST00000571263 XRRA1Q6P2D8 792 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 USP17L6PQ6QN14 398 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 FOXD4L3Q6VB84 417 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-206ENST00000571263 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-206ENST00000571263 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 FAM43AQ8N2R8 423 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 LINC00301Q8NCQ3 95 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-206ENST00000571263 MPHOSPH6Q99547 160 aaKnown RBP13.58□□□□□ -0.24
CDRT1-206ENST00000571263 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 ZFYVE28Q9HCC9 887 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 BTBD7Q9P203 1132 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 A0A0G2JMZ2 1700 aa13.58□□□□□ -0.24
CDRT1-206ENST00000571263 LOC102724159A0A0B4J2E5 919 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 SPTLC2O15270 562 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 FIBPO43427 364 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 STRNO43815 780 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 MAP2K2P36507 400 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 SREBF1P36956 1147 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 ERVK-9P63128 1117 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 ERVK-24P63145 666 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 PWP2Q15269 919 aaKnown RBP13.57□□□□□ -0.24
CDRT1-206ENST00000571263 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 UBE2SQ16763 222 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 FAM110CQ1W6H9 321 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 ARL6IP4Q66PJ3 421 aaKnown RBP13.57□□□□□ -0.24
CDRT1-206ENST00000571263 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
CDRT1-206ENST00000571263 ANKRD35Q8N283 1001 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 RASGRP4Q8TDF6 673 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 FERMT2Q96AC1 680 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 PTPN18Q99952 460 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 PAGR1Q9BTK6 254 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 MOV10L1Q9BXT6 1211 aaKnown RBP13.57□□□□□ -0.24
CDRT1-206ENST00000571263 TMEM260Q9NX78 707 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 RIPK3Q9Y572 518 aa13.57□□□□□ -0.24
CDRT1-206ENST00000571263 CYP3A7-CYP3A51PA0A087WV96 503 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 NFIBO00712 420 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 PRPF40AO75400 957 aaKnown RBP13.56□□□□□ -0.24
CDRT1-206ENST00000571263 CNMDO75829 334 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 MBD3O95983 291 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 CYP2C8P10632 490 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 CYP3A7P24462 503 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 PRPHP41219 470 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 UBE2HP62256 183 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 RPS6P62753 249 aaKnown RBP13.56□□□□□ -0.24
CDRT1-206ENST00000571263 TAF1CQ15572 869 aaPredicted RBP13.56□□□□□ -0.24
CDRT1-206ENST00000571263 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 EARS2Q5JPH6 523 aaKnown RBP13.56□□□□□ -0.24
CDRT1-206ENST00000571263 ADALQ6DHV7 355 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 NCAPG2Q86XI2 1143 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 ABRAQ8N0Z2 381 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 DNERQ8NFT8 737 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 HOMER2Q9NSB8 354 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 ADD3Q9UEY8 706 aaKnown RBP13.56□□□□□ -0.24
CDRT1-206ENST00000571263 CLIC4Q9Y696 253 aa13.56□□□□□ -0.24
CDRT1-206ENST00000571263 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 STAM2O75886 525 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 FCER1AP12319 257 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 ERCC3P19447 782 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 MAPK4P31152 587 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms