RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 UNC80Q8N2C7 3258 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 RBM47A0AV96 593 aaKnown RBP20.66■□□□□ 0.9
CIITA-206ENST00000571190 TRIM6-TRIM34B2RNG4 842 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 ZEB2O60315 1214 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 SDSP20132 328 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 PSRC1Q6PGN9 363 aaPredicted RBP20.66■□□□□ 0.9
CIITA-206ENST00000571190 MFSD6Q6ZSS7 791 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 HERVK_113Q902F9 699 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 RILPL2Q969X0 211 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 NOC4LQ9BVI4 516 aaKnown RBP20.66■□□□□ 0.9
CIITA-206ENST00000571190 WDR11Q9BZH6 1224 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 CXXC1Q9P0U4 656 aaPredicted RBP20.66■□□□□ 0.9
CIITA-206ENST00000571190 ADD3Q9UEY8 706 aaKnown RBP20.66■□□□□ 0.9
CIITA-206ENST00000571190 NEDD4P46934 1319 aa20.66■□□□□ 0.9
CIITA-206ENST00000571190 LOC102724159A0A0B4J2E5 919 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 PTPDC1A2A3K4 754 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 IGHDP01880 384 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 PWP2Q15269 919 aaKnown RBP20.65■□□□□ 0.9
CIITA-206ENST00000571190 B4GALNT3Q6L9W6 998 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 PLEKHM2Q8IWE5 1019 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 USP38Q8NB14 1042 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 WNT8AQ9H1J5 351 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 CDH23Q9H251 3354 aa20.65■□□□□ 0.9
CIITA-206ENST00000571190 PCP11498 1178 aaKnown RBP20.64■□□□□ 0.89
CIITA-206ENST00000571190 EDNRBP24530 442 aa20.64■□□□□ 0.89
CIITA-206ENST00000571190 CALML3P27482 149 aa20.64■□□□□ 0.89
CIITA-206ENST00000571190 CCL23P55773 120 aa20.64■□□□□ 0.89
CIITA-206ENST00000571190 ZKSCAN3Q9BRR0 538 aa20.64■□□□□ 0.89
CIITA-206ENST00000571190 SEZ6LQ9BYH1 1024 aa20.64■□□□□ 0.89
CIITA-206ENST00000571190 CPVLQ9H3G5 476 aa20.64■□□□□ 0.89
CIITA-206ENST00000571190 OSBPL3Q9H4L5 887 aa20.64■□□□□ 0.89
CIITA-206ENST00000571190 WDR19Q8NEZ3 1342 aa20.63■□□□□ 0.89
CIITA-206ENST00000571190 GOLGA8HP0CJ92 632 aa20.63■□□□□ 0.89
CIITA-206ENST00000571190 RPS6P62753 249 aaKnown RBP20.63■□□□□ 0.89
CIITA-206ENST00000571190 RNF207Q6ZRF8 634 aa20.63■□□□□ 0.89
CIITA-206ENST00000571190 ALDH8A1Q9H2A2 487 aaPredicted RBP20.63■□□□□ 0.89
CIITA-206ENST00000571190 LRRC37A2A6NM11 1700 aa20.62■□□□□ 0.89
CIITA-206ENST00000571190 EYSQ5T1H1 3165 aa20.62■□□□□ 0.89
CIITA-206ENST00000571190 FGBP02675 491 aa20.62■□□□□ 0.89
CIITA-206ENST00000571190 PURAQ00577 322 aaKnown RBP20.62■□□□□ 0.89
CIITA-206ENST00000571190 NUCB1Q02818 461 aa20.62■□□□□ 0.89
CIITA-206ENST00000571190 CHD1LQ86WJ1 897 aa20.62■□□□□ 0.89
CIITA-206ENST00000571190 DGKHQ86XP1 1220 aa20.62■□□□□ 0.89
CIITA-206ENST00000571190 UBA5Q9GZZ9 404 aa20.62■□□□□ 0.89
CIITA-206ENST00000571190 AAMPQ13685 434 aa20.61■□□□□ 0.89
CIITA-206ENST00000571190 ESR2Q92731 530 aa20.61■□□□□ 0.89
CIITA-206ENST00000571190 COPS5Q92905 334 aa20.61■□□□□ 0.89
CIITA-206ENST00000571190 RWDD1Q9H446 243 aaPredicted RBP20.61■□□□□ 0.89
CIITA-206ENST00000571190 RNF41Q9H4P4 317 aaPredicted RBP20.61■□□□□ 0.89
CIITA-206ENST00000571190 TRMT13Q9NUP7 481 aaKnown RBP20.61■□□□□ 0.89
CIITA-206ENST00000571190 PNMA2Q9UL42 364 aa20.61■□□□□ 0.89
CIITA-206ENST00000571190 MCM3APO60318 1980 aa20.61■□□□□ 0.89
CIITA-206ENST00000571190 ZNF213O14771 459 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 PDE4DQ08499 809 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 GPATCH4Q5T3I0 446 aaKnown RBP20.6■□□□□ 0.89
CIITA-206ENST00000571190 CWC27Q6UX04 472 aaKnown RBP20.6■□□□□ 0.89
CIITA-206ENST00000571190 OTOP2Q7RTS6 562 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 RGS22Q8NE09 1264 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 DNERQ8NFT8 737 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 OR6J1Q8NGC5 347 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 TBC1D5Q92609 795 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 ANKS1AQ92625 1134 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 SCLYQ96I15 445 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 PRDM12Q9H4Q4 367 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 POLR3EQ9NVU0 708 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 YBX2Q9Y2T7 364 aaKnown RBP20.6■□□□□ 0.89
CIITA-206ENST00000571190 CUL9Q8IWT3 2517 aa20.6■□□□□ 0.89
CIITA-206ENST00000571190 KDM4AO75164 1064 aa20.59■□□□□ 0.89
CIITA-206ENST00000571190 MYL3P08590 195 aa20.59■□□□□ 0.89
CIITA-206ENST00000571190 CYP2C9P11712 490 aa20.59■□□□□ 0.89
CIITA-206ENST00000571190 CPT1AP50416 773 aa20.59■□□□□ 0.89
CIITA-206ENST00000571190 MFAP1P55081 439 aaKnown RBP20.59■□□□□ 0.89
CIITA-206ENST00000571190 USH1GQ495M9 461 aa20.59■□□□□ 0.89
CIITA-206ENST00000571190 PPP1R13LQ8WUF5 828 aa20.59■□□□□ 0.89
CIITA-206ENST00000571190 A6NJR5 290 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 ARIH2O95376 493 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 ADGRE1Q14246 886 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 NBPF20Q3BBV1 942 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 PNMA1Q8ND90 353 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 SCFD2Q8WU76 684 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 MTG1Q9BT17 334 aaPredicted RBP20.58■□□□□ 0.89
CIITA-206ENST00000571190 NKX2-4Q9H2Z4 354 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 PRDM6Q9NQX0 595 aa20.58■□□□□ 0.89
CIITA-206ENST00000571190 LCTP09848 1927 aa20.58■□□□□ 0.88
CIITA-206ENST00000571190 TNKSO95271 1327 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 B4E1Z4 1266 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 NKRFO15226 690 aaKnown RBP eCLIP20.57■□□□□ 0.88
CIITA-206ENST00000571190 PPP2R5BQ15173 497 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 RAB30Q15771 203 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 CDC37Q16543 378 aaPredicted RBP20.57■□□□□ 0.88
CIITA-206ENST00000571190 CCDC62Q6P9F0 684 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 ADGRF4Q8IZF3 695 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 EXOC6Q8TAG9 804 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 IL25Q9H293 177 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 COL20A1Q9P218 1284 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 MSRAQ9UJ68 235 aa20.57■□□□□ 0.88
CIITA-206ENST00000571190 SUPT20HL2P0C7V6 817 aa20.56■□□□□ 0.88
CIITA-206ENST00000571190 TXNP10599 105 aaKnown RBP20.56■□□□□ 0.88
CIITA-206ENST00000571190 RPUSD2Q8IZ73 545 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms