RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 TRIP12Q14669 1992 aaPredicted RBP16.93■□□□□ 0.3
CIITA-205ENST00000571186 PRRC2BQ5JSZ5 2229 aaKnown RBP16.93■□□□□ 0.3
CIITA-205ENST00000571186 COL9A1P20849 921 aa16.93■□□□□ 0.3
CIITA-205ENST00000571186 CTDSPL2Q05D32 466 aa16.93■□□□□ 0.3
CIITA-205ENST00000571186 IL27Q8NEV9 243 aa16.93■□□□□ 0.3
CIITA-205ENST00000571186 PURBQ96QR8 312 aaKnown RBP16.93■□□□□ 0.3
CIITA-205ENST00000571186 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
CIITA-205ENST00000571186 CCPG1Q9ULG6 757 aa16.93■□□□□ 0.3
CIITA-205ENST00000571186 Q9Y3F1 56 aa16.93■□□□□ 0.3
CIITA-205ENST00000571186 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
CIITA-205ENST00000571186 ZBBXA8MT70 800 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 ERC2O15083 957 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 NMT2O60551 498 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 ADAMTS19Q8TE59 1207 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 SCLYQ96I15 445 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 VTA1Q9NP79 307 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
CIITA-205ENST00000571186 RANBP6O60518 1105 aaKnown RBP16.91■□□□□ 0.3
CIITA-205ENST00000571186 MYOGP15173 224 aa16.91■□□□□ 0.3
CIITA-205ENST00000571186 CCDC96Q2M329 555 aa16.91■□□□□ 0.3
CIITA-205ENST00000571186 ZMYM1Q5SVZ6 1142 aa16.91■□□□□ 0.3
CIITA-205ENST00000571186 PPP2R2DQ66LE6 453 aa16.91■□□□□ 0.3
CIITA-205ENST00000571186 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
CIITA-205ENST00000571186 MICALL1Q8N3F8 863 aa16.91■□□□□ 0.3
CIITA-205ENST00000571186 ALDH8A1Q9H2A2 487 aaPredicted RBP16.91■□□□□ 0.3
CIITA-205ENST00000571186 TSPYL2Q9H2G4 693 aaPredicted RBP16.91■□□□□ 0.3
CIITA-205ENST00000571186 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
CIITA-205ENST00000571186 PDE1AP54750 535 aa16.9■□□□□ 0.3
CIITA-205ENST00000571186 NUCB1Q02818 461 aa16.9■□□□□ 0.3
CIITA-205ENST00000571186 BAATQ14032 418 aaPredicted RBP16.9■□□□□ 0.3
CIITA-205ENST00000571186 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
CIITA-205ENST00000571186 UHRF1Q96T88 793 aaPredicted RBP16.9■□□□□ 0.3
CIITA-205ENST00000571186 WDR11Q9BZH6 1224 aa16.9■□□□□ 0.3
CIITA-205ENST00000571186 ADD3Q9UEY8 706 aaKnown RBP16.9■□□□□ 0.3
CIITA-205ENST00000571186 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
CIITA-205ENST00000571186 PCDHA11Q9Y5I1 949 aa16.9■□□□□ 0.3
CIITA-205ENST00000571186 ICAM1P05362 532 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 MYL3P08590 195 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 CYP2C9P11712 490 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 ATP2A2P16615 1042 aaKnown RBP16.89■□□□□ 0.29
CIITA-205ENST00000571186 SLC16A2P36021 539 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 DUSP28Q4G0W2 176 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 DEFB128Q7Z7B8 93 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 TET1Q8NFU7 2136 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 MORC4Q8TE76 937 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
CIITA-205ENST00000571186 TRMT13Q9NUP7 481 aaKnown RBP16.89■□□□□ 0.29
CIITA-205ENST00000571186 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.29
CIITA-205ENST00000571186 PTPDC1A2A3K4 754 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 ALDH5A1P51649 535 aaPredicted RBP16.88■□□□□ 0.29
CIITA-205ENST00000571186 TTLL4Q14679 1199 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 FAM47CQ5HY64 1035 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 VWCEQ96DN2 955 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 RAPGEFL1Q9UHV5 662 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 TNKSO95271 1327 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 XIRP2A4UGR9 3374 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 SCN10AQ9Y5Y9 1956 aa16.88■□□□□ 0.29
CIITA-205ENST00000571186 NFIBO00712 420 aa16.87■□□□□ 0.29
CIITA-205ENST00000571186 CPT1AP50416 773 aa16.87■□□□□ 0.29
CIITA-205ENST00000571186 PURAQ00577 322 aaKnown RBP16.87■□□□□ 0.29
CIITA-205ENST00000571186 SKIV2LQ15477 1246 aaKnown RBP16.87■□□□□ 0.29
CIITA-205ENST00000571186 TMEM67Q5HYA8 995 aa16.87■□□□□ 0.29
CIITA-205ENST00000571186 SYDE2Q5VT97 1194 aa16.87■□□□□ 0.29
CIITA-205ENST00000571186 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
CIITA-205ENST00000571186 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
CIITA-205ENST00000571186 GPCPD1Q9NPB8 672 aa16.87■□□□□ 0.29
CIITA-205ENST00000571186 RFXAPO00287 272 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 FOXP2O15409 715 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 PFKMP08237 780 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 CALML3P27482 149 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 NBPF20Q3BBV1 942 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 RRP12Q5JTH9 1297 aaKnown RBP16.86■□□□□ 0.29
CIITA-205ENST00000571186 PPP1R13LQ8WUF5 828 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 MTG1Q9BT17 334 aaPredicted RBP16.86■□□□□ 0.29
CIITA-205ENST00000571186 CERS4Q9HA82 394 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
CIITA-205ENST00000571186 FRMPD2Q68DX3 1309 aaPredicted RBP16.86■□□□□ 0.29
CIITA-205ENST00000571186 ACTN1P12814 892 aa16.85■□□□□ 0.29
CIITA-205ENST00000571186 TFF2Q03403 129 aa16.85■□□□□ 0.29
CIITA-205ENST00000571186 PDE4DQ08499 809 aa16.85■□□□□ 0.29
CIITA-205ENST00000571186 BRDTQ58F21 947 aaPredicted RBP16.85■□□□□ 0.29
CIITA-205ENST00000571186 VPS53Q5VIR6 699 aa16.85■□□□□ 0.29
CIITA-205ENST00000571186 BTNL9Q6UXG8 535 aa16.85■□□□□ 0.29
CIITA-205ENST00000571186 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
CIITA-205ENST00000571186 RETREG2Q8NC44 543 aa16.85■□□□□ 0.29
CIITA-205ENST00000571186 NECAB3Q96P71 396 aaPredicted RBP16.85■□□□□ 0.29
CIITA-205ENST00000571186 FTOQ9C0B1 505 aaKnown RBP eCLIP16.85■□□□□ 0.29
CIITA-205ENST00000571186 LOC102724159A0A0B4J2E5 919 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 RBM47A0AV96 593 aaKnown RBP16.84■□□□□ 0.29
CIITA-205ENST00000571186 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
CIITA-205ENST00000571186 ORC4O43929 436 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 CA3P07451 260 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 TOP1P11387 765 aaKnown RBP16.84■□□□□ 0.29
CIITA-205ENST00000571186 PDE4AP27815 886 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 NOVP48745 357 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 CHMP4BP1P59074 171 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms