RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	RPS6	P62753	249 aa	Known RBP	13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	AKAP17A	Q02040	695 aa	Known RBP	13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	OLFML2B	Q68BL8	750 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CPLX2	Q6PUV4	134 aa	Known RBP	13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	NECAB1	Q8N987	351 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	FAM133A	Q8N9E0	248 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	RGS22	Q8NE09	1264 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TBC1D5	Q92609	795 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ARMC5	Q96C12	935 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ABHD8	Q96I13	439 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SLC26A6	Q9BXS9	759 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	LIMCH1	Q9UPQ0	1083 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ALPK3	Q96L96	1907 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PRPF3	O43395	683 aa	Known RBP	13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MYC	P01106	439 aa	Predicted RBP	13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	UBXN2A	P68543	259 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SSRP1	Q08945	709 aa	Known RBP	13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TRIM32	Q13049	653 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MFSD14C	Q5VZR4	134 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	WWC2	Q6AWC2	1192 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TRIM22	Q8IYM9	498 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	GTF3C6	Q969F1	213 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ZNF333	Q96JL9	665 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	FGD4	Q96M96	766 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PURB	Q96QR8	312 aa	Known RBP	13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	RNF26	Q9BY78	433 aa	Predicted RBP	13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MAF1	Q9H063	256 aa		13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	RBM27	Q9P2N5	1060 aa	Known RBP	13.34	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SOWAHB	A6NEL2	793 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	hCG_1984214	I3L0E3	225 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	STXBP3	O00186	592 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CDKL5	O76039	1030 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SCG2	P13521	617 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PRKAR2A	P13861	404 aa	Known RBP	13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	HOXA13	P31271	388 aa	Predicted RBP	13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CYP2C19	P33261	490 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	HSD17B4	P51659	736 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	NAPA	P54920	295 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PFKFB3	Q16875	520 aa	Predicted RBP	13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ZNF713	Q8N859	430 aa	Predicted RBP	13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	IL27	Q8NEV9	243 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	TINF2	Q9BSI4	451 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ASTN1	O14525	1302 aa		13.33	□□□□□ -0.28
ATP2A3-208	ENST00000570845	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CD2BP2	O95400	341 aa	Known RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	IGHA2	P01877	340 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	POLR2M	P0CAP2	368 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ALDH5A1	P51649	535 aa	Predicted RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	GHRHR	Q02643	423 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CACNB2	Q08289	660 aa	Predicted RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MTFR1	Q15390	333 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PKN1	Q16512	942 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PPP1R18	Q6NYC8	613 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SAMD3	Q8N6K7	520 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	BARHL2	Q9NY43	387 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MAP3K20	Q9NYL2	800 aa	Known RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	COL20A1	Q9P218	1284 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ADD3	Q9UEY8	706 aa	Known RBP	13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SYNGAP1	Q96PV0	1343 aa		13.32	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ASB14	A6NK59	587 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	DTNB	O60941	627 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	DEXI	O95424	95 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CTDNEP1	O95476	244 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CCL5	P13501	91 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ST3GAL1	Q11201	340 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MAP3K21	Q5TCX8	1036 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	TYW1B	Q6NUM6	668 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MAMDC4	Q6UXC1	1216 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ARMCX2	Q7L311	632 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	FCHSD1	Q86WN1	690 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CCDC83	Q8IWF9	413 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MSL3	Q8N5Y2	521 aa	Known RBP	13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	DNER	Q8NFT8	737 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SMARCC2	Q8TAQ2	1214 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CUL5	Q93034	780 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	TAAR1	Q96RJ0	339 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	UNC93B1	Q9H1C4	597 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PSTPIP2	Q9H939	334 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	HMX1	Q9NP08	348 aa	Predicted RBP	13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	DNAH12	Q6ZR08	3092 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	RPTOR	Q8N122	1335 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	STK36	Q9NRP7	1315 aa		13.31	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CCDC85C	A6NKD9	419 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CYBA	P13498	195 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CNGA1	P29973	690 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CCND3	P30281	292 aa	Predicted RBP	13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ADCY7	P51828	1080 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PRAMEF19	Q5SWL8	479 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	USP17L6P	Q6QN14	398 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	NSUN7	Q8NE18	718 aa	Known RBP	13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	RMDN3	Q96TC7	470 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MPHOSPH6	Q99547	160 aa	Known RBP	13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	RNF208	Q9H0X6	261 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms