RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 ZNF263O14978 683 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 RHOBTB3O94955 611 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 FAM107AO95990 144 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 MTIF2P46199 727 aaKnown RBP17.11■□□□□ 0.33
SMG6-207ENST00000570756 IL17AQ16552 155 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 CFAP221Q4G0U5 840 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 PIK3AP1Q6ZUJ8 805 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 RASSF8Q8NHQ8 419 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 MYCBPAPQ8TBZ2 947 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 CCT8L2Q96SF2 557 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 MLXIPQ9HAP2 919 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 PLAGL2Q9UPG8 496 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 NF2P35240 595 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 MDH1P40925 334 aaKnown RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 CCDC13Q8IYE1 715 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 ARFGAP2Q8N6H7 521 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 BANK1Q8NDB2 785 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 CCDC47Q96A33 483 aaKnown RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 ACTR5Q9H9F9 607 aaPredicted RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 GDF3Q9NR23 364 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 LCA5LO95447 670 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 KLK7P49862 253 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 KIF11P52732 1056 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 CTSWP56202 376 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 MRPS25P82663 173 aaKnown RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 IFIT1BQ5T764 474 aaKnown RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 CCDC50Q8IVM0 306 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 ATP6V1G3Q96LB4 118 aa17.1■□□□□ 0.33
SMG6-207ENST00000570756 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 ZSCAN10Q96SZ4 725 aaPredicted RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 RBM12Q9NTZ6 932 aaKnown RBP17.1■□□□□ 0.33
SMG6-207ENST00000570756 MYH10P35580 1976 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 RASSF9O75901 435 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 CXCR5P32302 372 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 PPP1R2P41236 205 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 NLRP5P59047 1200 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 CEP85LQ5SZL2 805 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
SMG6-207ENST00000570756 C3orf20Q8ND61 904 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 WHAMMQ8TF30 809 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 MCM8Q9UJA3 840 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 EP400Q96L91 3159 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 GOLGA6L10A6NI86 522 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 AKR1B10O60218 316 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 ELF1P32519 619 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 PPP4R3AQ6IN85 833 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 ZSCAN29Q8IWY8 852 aaPredicted RBP17.09■□□□□ 0.33
SMG6-207ENST00000570756 PSMB7Q99436 277 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 NFU1Q9UMS0 254 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
SMG6-207ENST00000570756 BCORQ6W2J9 1755 aa17.09■□□□□ 0.33
SMG6-207ENST00000570756 SLC5A1P13866 664 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 CCNE1P24864 410 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 EVA1CP58658 441 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 IFT88Q13099 833 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 CCDC121Q6ZUS5 278 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 TMTC3Q6ZXV5 915 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 P2RX5Q93086 422 aa17.08■□□□□ 0.33
SMG6-207ENST00000570756 DUSP9Q99956 384 aaKnown RBP17.08■□□□□ 0.33
SMG6-207ENST00000570756 KLRC4O43908 158 aa17.08■□□□□ 0.32
SMG6-207ENST00000570756 DDAH1O94760 285 aa17.08■□□□□ 0.32
SMG6-207ENST00000570756 HEXIM1O94992 359 aaKnown RBP17.08■□□□□ 0.32
SMG6-207ENST00000570756 RASGRF1Q13972 1273 aa17.08■□□□□ 0.32
SMG6-207ENST00000570756 IQCA1Q86XH1 822 aa17.08■□□□□ 0.32
SMG6-207ENST00000570756 NOX5Q96PH1 765 aa17.08■□□□□ 0.32
SMG6-207ENST00000570756 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.32
SMG6-207ENST00000570756 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
SMG6-207ENST00000570756 COL5A2P05997 1499 aaPredicted RBP17.07■□□□□ 0.32
SMG6-207ENST00000570756 MINDY4BA8MYZ0 360 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 E7EVH7 732 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 PJA2O43164 708 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 PLEKP08567 350 aaPredicted RBP17.07■□□□□ 0.32
SMG6-207ENST00000570756 CARSP49589 748 aaKnown RBP17.07■□□□□ 0.32
SMG6-207ENST00000570756 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
SMG6-207ENST00000570756 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 RNF10Q8N5U6 811 aaKnown RBP17.07■□□□□ 0.32
SMG6-207ENST00000570756 IFT81Q8WYA0 676 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 NGLY1Q96IV0 654 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 EPB41L5Q9HCM4 733 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 SMARCAL1Q9NZC9 954 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 MYH3P11055 1940 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 EIF4A3P38919 411 aaKnown RBP17.07■□□□□ 0.32
SMG6-207ENST00000570756 GUCY2DQ02846 1103 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms