RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 FTCDO95954 541 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 TSG101Q99816 390 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 CALCRLQ16602 461 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 ODF2Q5BJF6 829 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 C8orf74Q6P047 294 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 REXO1Q8N1G1 1221 aaKnown RBP17.03■□□□□ 0.32
USP43-202ENST00000570475 COG1Q8WTW3 980 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 HDAC7Q8WUI4 952 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 LRRC1Q9BTT6 524 aa17.03■□□□□ 0.32
USP43-202ENST00000570475 SCN11AQ9UI33 1791 aa17.02■□□□□ 0.32
USP43-202ENST00000570475 CCNE1P24864 410 aa17.02■□□□□ 0.32
USP43-202ENST00000570475 GNA11P29992 359 aa17.02■□□□□ 0.32
USP43-202ENST00000570475 HPDP32754 393 aaPredicted RBP17.02■□□□□ 0.32
USP43-202ENST00000570475 PBX1P40424 430 aa17.02■□□□□ 0.32
USP43-202ENST00000570475 LIG3P49916 1009 aa17.02■□□□□ 0.32
USP43-202ENST00000570475 GFPT1Q06210 699 aaPredicted RBP17.02■□□□□ 0.32
USP43-202ENST00000570475 IRF2BP1Q8IU81 584 aa17.02■□□□□ 0.32
USP43-202ENST00000570475 MS4A14Q96JA4 679 aa17.02■□□□□ 0.32
USP43-202ENST00000570475 ATP2C2O75185 946 aa17.02■□□□□ 0.31
USP43-202ENST00000570475 NPY5RQ15761 445 aa17.02■□□□□ 0.31
USP43-202ENST00000570475 CNNM4Q6P4Q7 775 aa17.02■□□□□ 0.31
USP43-202ENST00000570475 NEK8Q86SG6 692 aa17.02■□□□□ 0.31
USP43-202ENST00000570475 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.31
USP43-202ENST00000570475 MYO1AQ9UBC5 1043 aa17.02■□□□□ 0.31
USP43-202ENST00000570475 NKRFO15226 690 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP43-202ENST00000570475 CLSTN1O94985 981 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 SLC16A2P36021 539 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 ZBED6P86452 979 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 UBE2SQ16763 222 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 RNF187Q5TA31 235 aaPredicted RBP17.01■□□□□ 0.31
USP43-202ENST00000570475 DNAAF5Q86Y56 855 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 ZNF384Q8TF68 577 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 HSF2BPO75031 334 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 MYBL2P10244 700 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 KIF11P52732 1056 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 ARL6IP4Q66PJ3 421 aaKnown RBP17.01■□□□□ 0.31
USP43-202ENST00000570475 EHD4Q9H223 541 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 CAPN11Q9UMQ6 739 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 SHTN1A0MZ66 631 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 PDE2AO00408 941 aaPredicted RBP17.01■□□□□ 0.31
USP43-202ENST00000570475 MAP2K7O14733 419 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 POLR2FP61218 127 aaKnown RBP17.01■□□□□ 0.31
USP43-202ENST00000570475 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
USP43-202ENST00000570475 BCAS4Q8TDM0 211 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 CAPN6Q9Y6Q1 641 aa17.01■□□□□ 0.31
USP43-202ENST00000570475 LRRC53A6NM62 1247 aa17■□□□□ 0.31
USP43-202ENST00000570475 GNGT1P63211 74 aa17■□□□□ 0.31
USP43-202ENST00000570475 APBA1Q02410 837 aa17■□□□□ 0.31
USP43-202ENST00000570475 PRPF4BQ13523 1007 aaKnown RBP17■□□□□ 0.31
USP43-202ENST00000570475 TAF4BQ92750 862 aa17■□□□□ 0.31
USP43-202ENST00000570475 TRIM9Q9C026 710 aa17■□□□□ 0.31
USP43-202ENST00000570475 PCDHA13Q9Y5I0 950 aa17■□□□□ 0.31
USP43-202ENST00000570475 EHHADHQ08426 723 aa17■□□□□ 0.31
USP43-202ENST00000570475 NAALADL2Q58DX5 795 aa17■□□□□ 0.31
USP43-202ENST00000570475 WDR59Q6PJI9 974 aa17■□□□□ 0.31
USP43-202ENST00000570475 MSANTD4Q8NCY6 345 aa17■□□□□ 0.31
USP43-202ENST00000570475 NUP58Q9BVL2 599 aa17■□□□□ 0.31
USP43-202ENST00000570475 NDST4Q9H3R1 872 aa17■□□□□ 0.31
USP43-202ENST00000570475 THAP9Q9H5L6 903 aa17■□□□□ 0.31
USP43-202ENST00000570475 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
USP43-202ENST00000570475 DMGDHQ9UI17 866 aaKnown RBP17■□□□□ 0.31
USP43-202ENST00000570475 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
USP43-202ENST00000570475 SPAG5Q96R06 1193 aa17■□□□□ 0.31
USP43-202ENST00000570475 ITIH6Q6UXX5 1313 aa17■□□□□ 0.31
USP43-202ENST00000570475 TDP2O95551 362 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 GUCY2DQ02846 1103 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 CT47A1Q5JQC4 288 aaPredicted RBP16.99■□□□□ 0.31
USP43-202ENST00000570475 MED4Q9NPJ6 270 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 ANAPC4Q9UJX5 808 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 EBAG9O00559 213 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 BTDP43251 543 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 RCAN1P53805 252 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 TTC31Q49AM3 519 aaPredicted RBP16.99■□□□□ 0.31
USP43-202ENST00000570475 DCAF17Q5H9S7 520 aaPredicted RBP16.99■□□□□ 0.31
USP43-202ENST00000570475 SRLQ86TD4 932 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 RAB34Q9BZG1 259 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 CYTH3O43739 400 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 UFL1O94874 794 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 TUBB4BP68371 445 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 RCSD1Q6JBY9 416 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 SH2D3CQ8N5H7 860 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
USP43-202ENST00000570475 TRIM31Q9BZY9 425 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 ZNF287Q9HBT7 754 aa16.99■□□□□ 0.31
USP43-202ENST00000570475 TUBBP07437 444 aa16.98■□□□□ 0.31
USP43-202ENST00000570475 RBM5P52756 815 aaKnown RBP eCLIP16.98■□□□□ 0.31
USP43-202ENST00000570475 GRIK5Q16478 980 aa16.98■□□□□ 0.31
USP43-202ENST00000570475 TRAPPC11Q7Z392 1133 aa16.98■□□□□ 0.31
USP43-202ENST00000570475 GOLPH3Q9H4A6 298 aa16.98■□□□□ 0.31
USP43-202ENST00000570475 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
USP43-202ENST00000570475 EPHB6O15197 1021 aa16.98■□□□□ 0.31
USP43-202ENST00000570475 RFC4P35249 363 aa16.98■□□□□ 0.31
USP43-202ENST00000570475 VAV2P52735 878 aa16.98■□□□□ 0.31
USP43-202ENST00000570475 TTI2Q6NXR4 508 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms