RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 MBD4O95243 580 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 PTPROQ16827 1216 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 TKFCQ3LXA3 575 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 KIAA1211Q6ZU35 1233 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 FAM133AQ8N9E0 248 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.28□□□□□ -0.44
TCF4-244ENST00000570146 FRAT1Q92837 279 aaPredicted RBP12.28□□□□□ -0.44
TCF4-244ENST00000570146 RAD9AQ99638 391 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 VTA1Q9NP79 307 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 PRKAG3Q9UGI9 489 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 MTUS1Q9ULD2 1270 aa12.28□□□□□ -0.44
TCF4-244ENST00000570146 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
TCF4-244ENST00000570146 ZNFX1Q9P2E3 1918 aaKnown RBP12.27□□□□□ -0.44
TCF4-244ENST00000570146 GOLIM4O00461 696 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 KPNA6O60684 536 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 EFCAB14O75071 495 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 ARHGEF15O94989 841 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 PARNO95453 639 aaKnown RBP12.27□□□□□ -0.45
TCF4-244ENST00000570146 MYL3P08590 195 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 TRIM27P14373 513 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 IL9P15248 144 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 IKQ13123 557 aaPredicted RBP12.27□□□□□ -0.45
TCF4-244ENST00000570146 PKN1Q16512 942 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 NFRKBQ6P4R8 1299 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
TCF4-244ENST00000570146 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
TCF4-244ENST00000570146 SUGCTQ9HAC7 445 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 ZNF287Q9HBT7 754 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 CLIP2Q9UDT6 1046 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
TCF4-244ENST00000570146 CYP2D7A0A087X1C5 515 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 TCRBV5S4A2TA0A5A2 114 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 POTEB3A0JP26 581 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 PRKAB2O43741 272 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 PTPN5P54829 565 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 ERVK-21P61565 698 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 WDR5P61964 334 aaKnown RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 PURAQ00577 322 aaKnown RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 DUSP28Q4G0W2 176 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 POTEBQ6S5H4 581 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 EEPD1Q7L9B9 569 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 FBXO16Q8IX29 292 aaPredicted RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 TRMT2AQ8IZ69 625 aaKnown RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 CHURC1Q8WUH1 139 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 POP1Q99575 1024 aaKnown RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 A1CFQ9NQ94 594 aaKnown RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 RNF146Q9NTX7 359 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
TCF4-244ENST00000570146 SLC4A4Q9Y6R1 1079 aa12.26□□□□□ -0.45
TCF4-244ENST00000570146 NAV1Q8NEY1 1877 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 GBF1Q92538 1859 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 LCHNA4D1U4 455 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 SOWAHBA6NEL2 793 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
TCF4-244ENST00000570146 STAT2P52630 851 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 NBPF20Q3BBV1 942 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 TIGD5Q53EQ6 642 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 TAPT1Q6NXT6 567 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 EP400NLQ6ZTU2 488 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 HFE2Q6ZVN8 426 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 FBXO22Q8NEZ5 403 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 CAGE1Q8TC20 777 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 AFAP1L1Q8TED9 768 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 MPHOSPH6Q99547 160 aaKnown RBP12.25□□□□□ -0.45
TCF4-244ENST00000570146 PDGFCQ9NRA1 345 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 ADD3Q9UEY8 706 aaKnown RBP12.25□□□□□ -0.45
TCF4-244ENST00000570146 USP34Q70CQ2 3546 aa12.25□□□□□ -0.45
TCF4-244ENST00000570146 CFAP54Q96N23 3096 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 ABHD14A-ACY1A0A1B0GW23 586 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 NCK2O43639 380 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 GJB5O95377 273 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 BMP3P12645 472 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 CNKSR3Q6P9H4 555 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 FAM160B2Q86V87 743 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 ADHFE1Q8IWW8 467 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 ZNF444Q8N0Y2 327 aaPredicted RBP12.24□□□□□ -0.45
TCF4-244ENST00000570146 CLASRPQ8N2M8 674 aaKnown RBP12.24□□□□□ -0.45
TCF4-244ENST00000570146 GMCL1P1Q8NEA9 526 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 OR6J1Q8NGC5 347 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 NEK9Q8TD19 979 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 MRPL38Q96DV4 380 aaKnown RBP12.24□□□□□ -0.45
TCF4-244ENST00000570146 TRERF1Q96PN7 1200 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 WDR11Q9BZH6 1224 aa12.24□□□□□ -0.45
TCF4-244ENST00000570146 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
TCF4-244ENST00000570146 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
TCF4-244ENST00000570146 LINC01553A4QN01 128 aa12.23□□□□□ -0.45
TCF4-244ENST00000570146 TMEM232C9JQI7 657 aa12.23□□□□□ -0.45
TCF4-244ENST00000570146 H3BQ06 376 aaPredicted RBP12.23□□□□□ -0.45
TCF4-244ENST00000570146 NKRFO15226 690 aaKnown RBP eCLIP12.23□□□□□ -0.45
TCF4-244ENST00000570146 TTLL1O95922 423 aa12.23□□□□□ -0.45
TCF4-244ENST00000570146 IFIT2P09913 472 aaKnown RBP12.23□□□□□ -0.45
TCF4-244ENST00000570146 ALAS1P13196 640 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms