RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 NOL6Q9H6R4 1146 aaKnown RBP5.12□□□□□ -1.59
UBR1-211ENST00000569971 CAAP1Q9H8G2 361 aa5.12□□□□□ -1.59
UBR1-211ENST00000569971 METTL14Q9HCE5 456 aaKnown RBP5.12□□□□□ -1.59
UBR1-211ENST00000569971 C19orf73Q9NVV2 129 aa5.12□□□□□ -1.59
UBR1-211ENST00000569971 CGGBP1Q9UFW8 167 aaPredicted RBP5.12□□□□□ -1.59
UBR1-211ENST00000569971 KCNH3Q9ULD8 1083 aa5.12□□□□□ -1.59
UBR1-211ENST00000569971 NCANO14594 1321 aa5.12□□□□□ -1.59
UBR1-211ENST00000569971 DNAJC25-GNG10A0A024R161 153 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 GSG1L2A8MUP6 293 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 VAMP4O75379 141 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 CBX7O95931 251 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 KRT1P04264 644 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 GLDCP23378 1020 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 STAT3P40763 770 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 PLEKHG6Q3KR16 790 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 POMZP3Q6PJE2 187 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 PRR23BQ6ZRT6 265 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 TTLL10Q6ZVT0 673 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 FIBCD1Q8N539 461 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 PRPF38AQ8NAV1 312 aaKnown RBP5.11□□□□□ -1.59
UBR1-211ENST00000569971 SLC7A14Q8TBB6 771 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 PIWIL2Q8TC59 973 aaKnown RBP5.11□□□□□ -1.59
UBR1-211ENST00000569971 SYTL5Q8TDW5 730 aaPredicted RBP5.11□□□□□ -1.59
UBR1-211ENST00000569971 ASCC2Q9H1I8 757 aaPredicted RBP5.11□□□□□ -1.59
UBR1-211ENST00000569971 CARS2Q9HA77 564 aaKnown RBP5.11□□□□□ -1.59
UBR1-211ENST00000569971 CD320Q9NPF0 282 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 GFOD1Q9NXC2 390 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 MINPP1Q9UNW1 487 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 DIS3Q9Y2L1 958 aaKnown RBP5.11□□□□□ -1.59
UBR1-211ENST00000569971 ATP8A1Q9Y2Q0 1164 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 FHOD1Q9Y613 1164 aa5.11□□□□□ -1.59
UBR1-211ENST00000569971 KCNQ2O43526 872 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 DNAJC8O75937 253 aaPredicted RBP5.1□□□□□ -1.59
UBR1-211ENST00000569971 C6orf222P0C671 652 aaPredicted RBP5.1□□□□□ -1.59
UBR1-211ENST00000569971 RAC2P15153 192 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 KCNJ6P48051 423 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 CDKN1CP49918 316 aaPredicted RBP5.1□□□□□ -1.59
UBR1-211ENST00000569971 NFKB2Q00653 900 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 CT47A1Q5JQC4 288 aaPredicted RBP5.1□□□□□ -1.59
UBR1-211ENST00000569971 CDKAL1Q5VV42 579 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 TMC3Q7Z5M5 1100 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 LRRTM3Q86VH5 581 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 DDX42Q86XP3 938 aaKnown RBP eCLIP5.1□□□□□ -1.59
UBR1-211ENST00000569971 CRACR2BQ8N4Y2 399 aaPredicted RBP5.1□□□□□ -1.59
UBR1-211ENST00000569971 HSPA12BQ96MM6 686 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 ZDHHC15Q96MV8 337 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 ALPK1Q96QP1 1244 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 TARS2Q9BW92 718 aaKnown RBP5.1□□□□□ -1.59
UBR1-211ENST00000569971 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 IRF2BPLQ9H1B7 796 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 NDOR1Q9UHB4 597 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 UNC13AQ9UPW8 1703 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 ST14Q9Y5Y6 855 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 CAPN6Q9Y6Q1 641 aa5.1□□□□□ -1.59
UBR1-211ENST00000569971 SMARCA4P51532 1647 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 TOP2AP11388 1531 aaKnown RBP5.09□□□□□ -1.59
UBR1-211ENST00000569971 MEIS1O00470 390 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 PRRG2O14669 202 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 PDGFRBP09619 1106 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 C1QTNF9P0C862 333 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 HOXC12P31275 282 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 SOX5P35711 763 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 ECI1P42126 302 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 GFRA1P56159 465 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 NTRK3Q16288 839 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 DPY19L1Q2PZI1 675 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 TMPRSS7Q7RTY8 843 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 BRAPQ7Z569 592 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 FGD2Q7Z6J4 655 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 STRA8Q7Z7C7 330 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 RNF180Q86T96 592 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 FERMT3Q86UX7 667 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 TMEM145Q8NBT3 493 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 KCTD13Q8WZ19 329 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 DDX1Q92499 740 aaKnown RBP5.09□□□□□ -1.59
UBR1-211ENST00000569971 Q96M66 194 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 CCDC140Q96MF4 163 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 EPB41L4BQ9H329 900 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 SLC52A2Q9HAB3 445 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 TRIM39Q9HCM9 518 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 ATP13A1Q9HD20 1204 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 HOMER2Q9NSB8 354 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 GPATCH2Q9NW75 528 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 MAGEC2Q9UBF1 373 aaPredicted RBP5.09□□□□□ -1.59
UBR1-211ENST00000569971 SFMBT1Q9UHJ3 866 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 G3BP2Q9UN86 482 aaKnown RBP5.09□□□□□ -1.59
UBR1-211ENST00000569971 MAPRE3Q9UPY8 281 aa5.09□□□□□ -1.59
UBR1-211ENST00000569971 GPR55Q9Y2T6 319 aaPredicted RBP5.09□□□□□ -1.59
UBR1-211ENST00000569971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 FAM83GA6ND36 823 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 PARNO95453 639 aaKnown RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 SNRPB2P08579 225 aaKnown RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 TMEM253P0C7T8 217 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 GABREP78334 506 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 CYP4F3Q08477 520 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 PRSS53Q2L4Q9 553 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 TRIM61Q5EBN2 209 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 DENND5AQ6IQ26 1287 aa5.08□□□□□ -1.6
UBR1-211ENST00000569971 LEO1Q8WVC0 666 aaPredicted RBP5.08□□□□□ -1.6
UBR1-211ENST00000569971 SCLYQ96I15 445 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms