RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SASH1O94885 1247 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 MAPK4P31152 587 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 CDKN1CP49918 316 aaPredicted RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 CHRNDQ07001 517 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 PICALMQ13492 652 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 AAK1Q2M2I8 961 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 MB21D1Q8N884 522 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 GLIS2Q9BZE0 524 aaPredicted RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 BICC1Q9H694 974 aaKnown RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 CD209Q9NNX6 404 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 KCTD5Q9NXV2 234 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 hCG_1642624A0A1W2PR95 340 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 FGFR1OPO95684 399 aaKnown RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 DNAJB2P25686 324 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 COL9A3Q14050 684 aaPredicted RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 NFXL1Q6ZNB6 911 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 PPHLN1Q8NEY8 458 aaKnown RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 ISCA1Q9BUE6 129 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 CNNM2Q9H8M5 875 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 DCAF16Q9NXF7 216 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 PI4KBQ9UBF8 816 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 SLC4A7Q9Y6M7 1214 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 PLCH1Q4KWH8 1693 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 WNK3Q9BYP7 1800 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 C10orf71Q711Q0 1435 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 NEURL1BA8MQ27 555 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 EVI5O60447 810 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 CHGBP05060 677 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMG1-217ENST00000569764 GALNT17Q6IS24 598 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 CCDC129Q6ZRS4 1044 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 TAS1R3Q7RTX0 852 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 PI4K2BQ8TCG2 481 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 SIL1Q9H173 461 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 HMX1Q9NP08 348 aaPredicted RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 PCDH10Q9P2E7 1040 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 MED23Q9ULK4 1368 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 ARID5AQ03989 594 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 NFKBIBQ15653 356 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 ASIC2Q16515 512 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 RRP12Q5JTH9 1297 aaKnown RBP7.45□□□□□ -1.22
SMG1-217ENST00000569764 PPP4R3AQ6IN85 833 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 FBXO33Q7Z6M2 555 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 TMEM110Q86TL2 294 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 RSPH3Q86UC2 560 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 FAM83AQ86UY5 434 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 OR8H2Q8N162 312 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 CSRNP1Q96S65 589 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 APBA2Q99767 749 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 SELENOOQ9BVL4 669 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 DEFB129Q9H1M3 183 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 OSBPL3Q9H4L5 887 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 ZIM2Q9NZV7 527 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.44□□□□□ -1.22
SMG1-217ENST00000569764 M0QZ92 97 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 PPFIA2O75334 1257 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 MMEP08473 750 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 MSL3P1P0C860 447 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 SRGAP2BP0DMP2 458 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 KRT20P35900 424 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 TMED1Q13445 227 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 PLCB4Q15147 1175 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 AKNAD1Q5T1N1 836 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 CYP4F22Q6NT55 531 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 ARL6IP6Q8N6S5 226 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 SLC43A3Q8NBI5 491 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 ABHD8Q96I13 439 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 USP26Q9BXU7 913 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 EXOC1Q9NV70 894 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 ACAD8Q9UKU7 415 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 MKL2Q9ULH7 1088 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 NRAPQ86VF7 1730 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 FAM221BA6H8Z2 402 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 RASSF10A6NK89 507 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 TSPAN6O43657 245 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 HOXC13P31276 330 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 HSPA4P34932 840 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 MCM2P49736 904 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 GNAQP50148 359 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 CASP7P55210 303 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 OTUD6AQ7L8S5 288 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 GSDMBQ8TAX9 411 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 FAM151AQ8WW52 585 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 OTUD5Q96G74 571 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 UBAC1Q9BSL1 405 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 FSD1Q9BTV5 496 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 NAPBQ9H115 298 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 BRMS1Q9HCU9 246 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 UTYO14607 1347 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 SRCAPQ6ZRS2 3230 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 UBE2Q2LH0YL09 131 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 FZD9O00144 591 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 RHOBTB3O94955 611 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 RPLP2P05387 115 aaKnown RBP7.44□□□□□ -1.22
SMG1-217ENST00000569764 TRIM21P19474 475 aaKnown RBP7.44□□□□□ -1.22
SMG1-217ENST00000569764 TSPAN7P41732 249 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 EPS15P42566 896 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms