RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 DNM1LO00429 736 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 PSMA5P28066 241 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 ALDH5A1P51649 535 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 FANCBQ8NB91 859 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 DNERQ8NFT8 737 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 MORC4Q8TE76 937 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 TCEANC2Q96MN5 208 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 JAKMIP1Q96N16 626 aaKnown RBP16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 SPZ1Q9BXG8 430 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 KATNBL1Q9H079 304 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 PCDHA1Q9Y5I3 950 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 KIAA1217Q5T5P2 1943 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 PPP1R11O60927 126 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 COL6A1P12109 1028 aa16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 RXRAP19793 462 aa16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 GJC2Q5T442 439 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 PRPF38BQ5VTL8 546 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 BLOC1S2Q6QNY1 142 aa16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 TBC1D5Q92609 795 aa16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 MPHOSPH6Q99547 160 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-218ENST00000569569 B4DLN1 442 aa16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 KBTBD13C9JR72 458 aa16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 DUSP11O75319 330 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 FGD1P98174 961 aa16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 LRRC41Q15345 812 aa16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 APOA5Q6Q788 366 aa16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 RNF180Q86T96 592 aa16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 SAMD3Q8N6K7 520 aa16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 RRP36Q96EU6 259 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 MAP3K20Q9NYL2 800 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-218ENST00000569569 ZBTB43O43298 467 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 PGK1P00558 417 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 CFBP00751 764 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
HERPUD1-218ENST00000569569 CPA1P15085 419 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 Q6ZUG5 572 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 EEPD1Q7L9B9 569 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 MICU3Q86XE3 530 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 RAB11FIP4Q86YS3 637 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 SRBD1Q8N5C6 995 aaKnown RBP16■□□□□ 0.15
HERPUD1-218ENST00000569569 SYTL5Q8TDW5 730 aaPredicted RBP16■□□□□ 0.15
HERPUD1-218ENST00000569569 VTA1Q9NP79 307 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 RBM28Q9NW13 759 aaKnown RBP16■□□□□ 0.15
HERPUD1-218ENST00000569569 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 NR2E3Q9Y5X4 410 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
HERPUD1-218ENST00000569569 MYH7BA7E2Y1 1941 aa16■□□□□ 0.15
HERPUD1-218ENST00000569569 OPLAHO14841 1288 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 EVI5O60447 810 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 EIF5BO60841 1220 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 PLEKHA8P1O95397 391 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 CASTP20810 708 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 RPS6KB1P23443 525 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 GHRHRQ02643 423 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 TNFAIP2Q03169 654 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 IQSEC1Q6DN90 963 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 TAPT1Q6NXT6 567 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 FBXO16Q8IX29 292 aaPredicted RBP15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 CMTR1Q8N1G2 835 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 FBXL16Q8N461 479 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 PIBF1Q8WXW3 757 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 TAAR1Q96RJ0 339 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 SEC63Q9UGP8 760 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-218ENST00000569569 KLF18A0A0U1RQI7 1052 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 ADCY6O43306 1168 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 ADAMTS4O75173 837 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 EDNRBP24530 442 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 ADCYAP1R1P41586 468 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 HSD17B4P51659 736 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 RCAN1P53805 252 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 PDE4DQ08499 809 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 PPP2R5BQ15173 497 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 DNAH12Q6ZR08 3092 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 TMTC3Q6ZXV5 915 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 NSUN6Q8TEA1 469 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 LENG1Q96BZ8 264 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 IWS1Q96ST2 819 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 RMDN3Q96TC7 470 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 TSEN34Q9BSV6 310 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 PDGFCQ9NRA1 345 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 COL20A1Q9P218 1284 aa15.98■□□□□ 0.15
HERPUD1-218ENST00000569569 SYNRGQ9UMZ2 1314 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 GJA9P57773 515 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 RTN1Q16799 776 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 ARHGEF16Q5VV41 709 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 KLHDC9Q8NEP7 349 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 BRF1Q92994 677 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 AGXT2Q9BYV1 514 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 TM6SF1Q9BZW5 370 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms