RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 APOA5Q6Q788 366 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 SLC30A10Q6XR72 485 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 MICU3Q86XE3 530 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 SAMD3Q8N6K7 520 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 DNERQ8NFT8 737 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 RRP36Q96EU6 259 aaKnown RBP11.38□□□□□ -0.59
CLN6-209ENST00000569336 PAWRQ96IZ0 340 aaKnown RBP11.38□□□□□ -0.59
CLN6-209ENST00000569336 FGD4Q96M96 766 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 LRRC2Q9BYS8 371 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 C11orf49Q9H6J7 331 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 VTA1Q9NP79 307 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 XPNPEP3Q9NQH7 507 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 RBM28Q9NW13 759 aaKnown RBP11.38□□□□□ -0.59
CLN6-209ENST00000569336 MAP3K20Q9NYL2 800 aaKnown RBP11.38□□□□□ -0.59
CLN6-209ENST00000569336 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 PCDHA1Q9Y5I3 950 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 SNX14Q9Y5W7 946 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 ZBTB43O43298 467 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 SNAI1O95863 264 aaPredicted RBP11.37□□□□□ -0.59
CLN6-209ENST00000569336 ZNF865P0CJ78 1059 aaPredicted RBP11.37□□□□□ -0.59
CLN6-209ENST00000569336 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
CLN6-209ENST00000569336 CASTP20810 708 aaKnown RBP11.37□□□□□ -0.59
CLN6-209ENST00000569336 EXOSC10Q01780 885 aaKnown RBP11.37□□□□□ -0.59
CLN6-209ENST00000569336 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 PRAMEF19Q5SWL8 479 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 RNF180Q86T96 592 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 PIGSQ96S52 555 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 MYL10Q9BUA6 226 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 SPC25Q9HBM1 224 aa11.37□□□□□ -0.59
CLN6-209ENST00000569336 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
CLN6-209ENST00000569336 ASTN1O14525 1302 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 KLF18A0A0U1RQI7 1052 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 DUSP11O75319 330 aaKnown RBP11.36□□□□□ -0.59
CLN6-209ENST00000569336 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 GHRHRQ02643 423 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 PDE4DQ08499 809 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 RTN1Q16799 776 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 CCDC144BQ3MJ40 725 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 FBXL16Q8N461 479 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 FANCBQ8NB91 859 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 MORC4Q8TE76 937 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
CLN6-209ENST00000569336 DPF3Q92784 378 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 TCEANC2Q96MN5 208 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 USP26Q9BXU7 913 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 NID2Q14112 1375 aa11.36□□□□□ -0.59
CLN6-209ENST00000569336 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 LOXHD1Q8IVV2 1947 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 CCDC196A0A1B0GTZ2 297 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 GOLGA8AA7E2F4 631 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 H0YGN5 161 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 CYTH3O43739 400 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 EVI5O60447 810 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 CFBP00751 764 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
CLN6-209ENST00000569336 RXRAP19793 462 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 HSD17B4P51659 736 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 RUFY3Q7L099 469 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 NSUN6Q8TEA1 469 aaKnown RBP11.35□□□□□ -0.59
CLN6-209ENST00000569336 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 NAP1L2Q9ULW6 460 aaPredicted RBP11.35□□□□□ -0.59
CLN6-209ENST00000569336 NR2E3Q9Y5X4 410 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 CYP46A1Q9Y6A2 500 aa11.35□□□□□ -0.59
CLN6-209ENST00000569336 hCG_1984214I3L0E3 225 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 PPP1R11O60927 126 aaPredicted RBP11.34□□□□□ -0.59
CLN6-209ENST00000569336 PLEKHA8P1O95397 391 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 COL6A1P12109 1028 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
CLN6-209ENST00000569336 METAP2P50579 478 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLN6-209ENST00000569336 ANAPC15P60006 121 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 TNFAIP2Q03169 654 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
CLN6-209ENST00000569336 LRRC41Q15345 812 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 GJC2Q5T442 439 aaPredicted RBP11.34□□□□□ -0.59
CLN6-209ENST00000569336 Q6ZUG5 572 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 FBXO16Q8IX29 292 aaPredicted RBP11.34□□□□□ -0.59
CLN6-209ENST00000569336 ZNF713Q8N859 430 aaPredicted RBP11.34□□□□□ -0.59
CLN6-209ENST00000569336 BRF1Q92994 677 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 CUL5Q93034 780 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 RMDN3Q96TC7 470 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 AGXT2Q9BYV1 514 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 KATNBL1Q9H079 304 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
CLN6-209ENST00000569336 CNTNAP5Q8WYK1 1306 aa11.34□□□□□ -0.59
CLN6-209ENST00000569336 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 GCOM1H8Y6P7 765 aaPredicted RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 ADAMTS4O75173 837 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 POLR2MP0CAP2 368 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 CPA1P15085 419 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 EDNRBP24530 442 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 CST5P28325 142 aaPredicted RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 SLC35G1Q2M3R5 365 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms