RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 CALML3P27482 149 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 RPS6P62753 249 aaKnown RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 HMGN5P82970 282 aaKnown RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 GHRHRQ02643 423 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 OLFML2BQ68BL8 750 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 ZNF467Q7Z7K2 595 aaPredicted RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 MSL3Q8N5Y2 521 aaKnown RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 SH3GLB2Q9NR46 395 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 ORC3Q9UBD5 711 aaPredicted RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 KIF3AQ9Y496 699 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 PTCH2Q9Y6C5 1203 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 LOC102724159A0A0B4J2E5 919 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 COBLO75128 1261 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 PPFIA3O75145 1194 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 GRK4P32298 578 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 HSD17B4P51659 736 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 ADCY7P51828 1080 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 PWP2Q15269 919 aaKnown RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 PKN1Q16512 942 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 ZNF792Q3KQV3 632 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 SLC9C1Q4G0N8 1177 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 MFSD14CQ5VZR4 134 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 SLC30A10Q6XR72 485 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 HSCBQ8IWL3 235 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 FAM133AQ8N9E0 248 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 NSUN7Q8NE18 718 aaKnown RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 BICD2Q8TD16 824 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 SNX21Q969T3 373 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 C6orf50Q9HD87 102 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
CHD9-219ENST00000569225 ESYT2A0FGR8 921 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 ASB14A6NK59 587 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 CTDNEP1O95476 244 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 HMGCRP04035 888 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 GNA11P29992 359 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 MCTP2Q6DN12 878 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 DNERQ8NFT8 737 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 SMARCC2Q8TAQ2 1214 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 SYTL5Q8TDW5 730 aaPredicted RBP10.48□□□□□ -0.73
CHD9-219ENST00000569225 MAML3Q96JK9 1138 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 RIC8AQ9NPQ8 531 aa10.48□□□□□ -0.73
CHD9-219ENST00000569225 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.48□□□□□ -0.73
CHD9-219ENST00000569225 SMCO2A6NFE2 343 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 K7ELQ4 463 aaPredicted RBP10.47□□□□□ -0.73
CHD9-219ENST00000569225 OPLAHO14841 1288 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 ELNP15502 786 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 UBXN2AP68543 259 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 TRIM29Q14134 588 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 GALNT17Q6IS24 598 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 NPLOC4Q8TAT6 608 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 NSUN6Q8TEA1 469 aaKnown RBP10.47□□□□□ -0.73
CHD9-219ENST00000569225 TINF2Q9BSI4 451 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 EHMT1Q9H9B1 1298 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 ZNF236Q9UL36 1845 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 SYNGAP1Q96PV0 1343 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 SPDYE3A6NKU9 549 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 JAK2O60674 1132 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
CHD9-219ENST00000569225 NLRP5P59047 1200 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 CNTN2Q02246 1040 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 ST3GAL1Q11201 340 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 ARHGEF16Q5VV41 709 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 TRIB2Q92519 343 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 RMDN3Q96TC7 470 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 ALG1Q9BT22 464 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 ZMYND12Q9H0C1 365 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 NRBP1Q9UHY1 535 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
CHD9-219ENST00000569225 COL11A1P12107 1806 aaPredicted RBP10.46□□□□□ -0.73
CHD9-219ENST00000569225 SOWAHBA6NEL2 793 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 FOSP01100 380 aaPredicted RBP10.46□□□□□ -0.74
CHD9-219ENST00000569225 ALDH5A1P51649 535 aaPredicted RBP10.46□□□□□ -0.74
CHD9-219ENST00000569225 CCL14Q16627 93 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 TYW1BQ6NUM6 668 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 FCHSD1Q86WN1 690 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.74
CHD9-219ENST00000569225 TBC1D5Q92609 795 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 IWS1Q96ST2 819 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 BRMS1Q9HCU9 246 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.74
CHD9-219ENST00000569225 MEIS2O14770 477 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 INHAP05111 366 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 FDPSP14324 419 aaKnown RBP10.45□□□□□ -0.74
CHD9-219ENST00000569225 PDE4DQ08499 809 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 AP3B2Q13367 1082 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 COL13A1Q5TAT6 717 aaPredicted RBP10.45□□□□□ -0.74
CHD9-219ENST00000569225 USP17L6PQ6QN14 398 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 SH3TC2Q8TF17 1288 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 FLRT1Q9NZU1 646 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 CASP8AP2Q9UKL3 1982 aa10.45□□□□□ -0.74
CHD9-219ENST00000569225 HSP90AA1P07900 732 aaKnown RBP10.44□□□□□ -0.74
CHD9-219ENST00000569225 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
CHD9-219ENST00000569225 CYP2C19P33261 490 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms