RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
CDH3-210ENST00000569117 POM121Q96HA1 1249 aa12.03□□□□□ -0.48
CDH3-210ENST00000569117 AIFM3Q96NN9 605 aa12.03□□□□□ -0.48
CDH3-210ENST00000569117 TEX13BQ9BXU2 312 aa12.03□□□□□ -0.48
CDH3-210ENST00000569117 CWC22Q9HCG8 908 aaKnown RBP12.03□□□□□ -0.48
CDH3-210ENST00000569117 SH3GLB2Q9NR46 395 aa12.03□□□□□ -0.48
CDH3-210ENST00000569117 MYH15Q9Y2K3 1946 aa12.03□□□□□ -0.48
CDH3-210ENST00000569117 ESYT2A0FGR8 921 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 CNMDO75829 334 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 ALDH1A1P00352 501 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 XBP1P17861 261 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 TMEM132BQ14DG7 1078 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 TAF1CQ15572 869 aaPredicted RBP12.02□□□□□ -0.49
CDH3-210ENST00000569117 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 CCDC12Q8WUD4 166 aaPredicted RBP12.02□□□□□ -0.49
CDH3-210ENST00000569117 SHISA4Q96DD7 197 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 RAVER2Q9HCJ3 691 aaKnown RBP12.02□□□□□ -0.49
CDH3-210ENST00000569117 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 VPS54Q9P1Q0 977 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 BTBD7Q9P203 1132 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 MORF4L1Q9UBU8 362 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 CCPG1Q9ULG6 757 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 CTDP1Q9Y5B0 961 aaPredicted RBP12.02□□□□□ -0.49
CDH3-210ENST00000569117 ABCB11O95342 1321 aa12.02□□□□□ -0.49
CDH3-210ENST00000569117 LCTP09848 1927 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 MAP3K7O43318 606 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 NAPAP54920 295 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 ERVK-24P63145 666 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 FAM110CQ1W6H9 321 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 TKFCQ3LXA3 575 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 USH1GQ495M9 461 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 SNRNP48Q6IEG0 339 aaKnown RBP12.01□□□□□ -0.49
CDH3-210ENST00000569117 TEX2Q8IWB9 1127 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 FBXO18Q8NFZ0 1043 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 COA7Q96BR5 231 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 AGBL1Q96MI9 1066 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 EPAS1Q99814 870 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 PAGR1Q9BTK6 254 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 PHF20Q9BVI0 1012 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 CFHR5Q9BXR6 569 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 SPATC1LQ9H0A9 340 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 TXNRD2Q9NNW7 524 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 RBPJLQ9UBG7 517 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 MGAMO43451 1857 aa12.01□□□□□ -0.49
CDH3-210ENST00000569117 OPLAHO14841 1288 aa12□□□□□ -0.49
CDH3-210ENST00000569117 CA12O43570 354 aa12□□□□□ -0.49
CDH3-210ENST00000569117 TLR2O60603 784 aa12□□□□□ -0.49
CDH3-210ENST00000569117 MMP1P03956 469 aa12□□□□□ -0.49
CDH3-210ENST00000569117 TAL1P17542 331 aaPredicted RBP12□□□□□ -0.49
CDH3-210ENST00000569117 SYT1P21579 422 aa12□□□□□ -0.49
CDH3-210ENST00000569117 COPB2P35606 906 aa12□□□□□ -0.49
CDH3-210ENST00000569117 GHRHRQ02643 423 aa12□□□□□ -0.49
CDH3-210ENST00000569117 CRHR2Q13324 411 aa12□□□□□ -0.49
CDH3-210ENST00000569117 TRIM29Q14134 588 aa12□□□□□ -0.49
CDH3-210ENST00000569117 NPY5RQ15761 445 aa12□□□□□ -0.49
CDH3-210ENST00000569117 LARP1BQ659C4 914 aaKnown RBP12□□□□□ -0.49
CDH3-210ENST00000569117 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
CDH3-210ENST00000569117 GALNT17Q6IS24 598 aa12□□□□□ -0.49
CDH3-210ENST00000569117 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
CDH3-210ENST00000569117 CPXCR1Q8N123 301 aa12□□□□□ -0.49
CDH3-210ENST00000569117 DAGLBQ8NCG7 672 aa12□□□□□ -0.49
CDH3-210ENST00000569117 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
CDH3-210ENST00000569117 ZFYVE28Q9HCC9 887 aa12□□□□□ -0.49
CDH3-210ENST00000569117 GJB4Q9NTQ9 266 aa12□□□□□ -0.49
CDH3-210ENST00000569117 LRRC37A2A6NM11 1700 aa12□□□□□ -0.49
CDH3-210ENST00000569117 H3BQV1 296 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 SLC25A27O95847 323 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 BCRP11274 1271 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 ALAS1P13196 640 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 CALML3P27482 149 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 STAT3P40763 770 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 CLCN6P51797 869 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 ADCY7P51828 1080 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 FOSBP53539 338 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 PLS1Q14651 629 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 KRT40Q6A162 431 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 ANKRD13CQ8N6S4 541 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 SHCBP1Q8NEM2 672 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 CHST13Q8NET6 341 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 MOV10L1Q9BXT6 1211 aaKnown RBP11.99□□□□□ -0.49
CDH3-210ENST00000569117 MAF1Q9H063 256 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 GLT8D2Q9H1C3 349 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 RIC8AQ9NPQ8 531 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 MRPL11Q9Y3B7 192 aaKnown RBP11.99□□□□□ -0.49
CDH3-210ENST00000569117 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
CDH3-210ENST00000569117 PLXNA1Q9UIW2 1896 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 ZSWIM8A7E2V4 1837 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 NFIBO00712 420 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 STX6O43752 255 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 PEX10O60683 326 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 GNA11P29992 359 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 NLRP5P59047 1200 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 CCNA1P78396 465 aa11.98□□□□□ -0.49
CDH3-210ENST00000569117 GUCY1B3Q02153 619 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms