RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 C1orf53Q5VUE5 145 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 CREB3L3Q68CJ9 461 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 NOL8Q76FK4 1167 aaKnown RBP23.47■■□□□ 1.35
ABCA3-206ENST00000569062 FBXO11Q86XK2 927 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 SPC25Q9HBM1 224 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 VTA1Q9NP79 307 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 GPHNQ9NQX3 736 aaPredicted RBP23.47■■□□□ 1.35
ABCA3-206ENST00000569062 GNEQ9Y223 722 aaKnown RBP23.47■■□□□ 1.35
ABCA3-206ENST00000569062 MOXD2PA6NHM9 499 aa23.46■■□□□ 1.35
ABCA3-206ENST00000569062 TROAPQ12815 778 aa23.46■■□□□ 1.35
ABCA3-206ENST00000569062 RGS22Q8NE09 1264 aa23.46■■□□□ 1.35
ABCA3-206ENST00000569062 MTMR8Q96EF0 704 aa23.46■■□□□ 1.35
ABCA3-206ENST00000569062 BAZ2BQ9UIF8 2168 aaKnown RBP23.46■■□□□ 1.35
ABCA3-206ENST00000569062 LAMA3Q16787 3333 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 LOC102724159A0A0B4J2E5 919 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 ASGR1P07306 291 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 BEX3Q00994 111 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 PWP2Q15269 919 aaKnown RBP23.45■■□□□ 1.34
ABCA3-206ENST00000569062 GNASQ5JWF2 1037 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 IQSEC1Q6DN90 963 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 LY9Q9HBG7 655 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 STARD7Q9NQZ5 370 aa23.45■■□□□ 1.34
ABCA3-206ENST00000569062 A0A1W2PPC1 479 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 PRC1O43663 620 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 PPP1R11O60927 126 aaPredicted RBP23.44■■□□□ 1.34
ABCA3-206ENST00000569062 CDC45O75419 566 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 NKX3-2P78367 333 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 TLE2Q04725 743 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 SH3RF1Q7Z6J0 888 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 TLK2Q86UE8 772 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 PCSK9Q8NBP7 692 aaKnown RBP23.44■■□□□ 1.34
ABCA3-206ENST00000569062 DNERQ8NFT8 737 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 NUP133Q8WUM0 1156 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 PRDM5Q9NQX1 630 aaPredicted RBP23.44■■□□□ 1.34
ABCA3-206ENST00000569062 PDLIM7Q9NR12 457 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 COL20A1Q9P218 1284 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 PRKAG2Q9UGJ0 569 aa23.44■■□□□ 1.34
ABCA3-206ENST00000569062 MRPL11Q9Y3B7 192 aaKnown RBP23.44■■□□□ 1.34
ABCA3-206ENST00000569062 ZBTB5O15062 677 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 CYTH3O43739 400 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 EDNRBP24530 442 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 MCM5P33992 734 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 CASC1Q6TDU7 716 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 CATIPQ7Z7H3 387 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 HOMER1Q86YM7 354 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 MYL10Q9BUA6 226 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 AMNQ9BXJ7 453 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 UBE2OQ9C0C9 1292 aaKnown RBP23.43■■□□□ 1.34
ABCA3-206ENST00000569062 RIOX1Q9H6W3 641 aa23.43■■□□□ 1.34
ABCA3-206ENST00000569062 DYNC1LI2O43237 492 aaPredicted RBP23.42■■□□□ 1.34
ABCA3-206ENST00000569062 PQBP1O60828 265 aaKnown RBP23.42■■□□□ 1.34
ABCA3-206ENST00000569062 PDE4DQ08499 809 aa23.42■■□□□ 1.34
ABCA3-206ENST00000569062 MCF2L2Q86YR7 1114 aa23.42■■□□□ 1.34
ABCA3-206ENST00000569062 SYTL5Q8TDW5 730 aaPredicted RBP23.42■■□□□ 1.34
ABCA3-206ENST00000569062 GLT1D1Q96MS3 346 aa23.42■■□□□ 1.34
ABCA3-206ENST00000569062 TAAR1Q96RJ0 339 aa23.42■■□□□ 1.34
ABCA3-206ENST00000569062 PIGSQ96S52 555 aa23.42■■□□□ 1.34
ABCA3-206ENST00000569062 RBM47A0AV96 593 aaKnown RBP23.41■■□□□ 1.34
ABCA3-206ENST00000569062 TRIM43BA6NCK2 446 aa23.41■■□□□ 1.34
ABCA3-206ENST00000569062 SH2B2O14492 632 aaPredicted RBP23.41■■□□□ 1.34
ABCA3-206ENST00000569062 OPLAHO14841 1288 aa23.41■■□□□ 1.34
ABCA3-206ENST00000569062 ZNF654Q8IZM8 581 aa23.41■■□□□ 1.34
ABCA3-206ENST00000569062 TRIM43Q96BQ3 446 aaPredicted RBP23.41■■□□□ 1.34
ABCA3-206ENST00000569062 LBHD1Q9BQE6 289 aaPredicted RBP23.41■■□□□ 1.34
ABCA3-206ENST00000569062 MTA3Q9BTC8 594 aa23.41■■□□□ 1.34
ABCA3-206ENST00000569062 WDR11Q9BZH6 1224 aa23.41■■□□□ 1.34
ABCA3-206ENST00000569062 MAF1Q9H063 256 aa23.41■■□□□ 1.34
ABCA3-206ENST00000569062 AP5M1Q9H0R1 490 aa23.41■■□□□ 1.34
ABCA3-206ENST00000569062 ELP1O95163 1332 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 CFBP00751 764 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 NEFLP07196 543 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 FSCN1Q16658 493 aaKnown RBP23.4■■□□□ 1.34
ABCA3-206ENST00000569062 DUSP28Q4G0W2 176 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 VTI1AQ96AJ9 217 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 TMEM87BQ96K49 555 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 MPHOSPH6Q99547 160 aaKnown RBP23.4■■□□□ 1.34
ABCA3-206ENST00000569062 LRRC2Q9BYS8 371 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 Q9Y3F1 56 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 PCDHA1Q9Y5I3 950 aa23.4■■□□□ 1.34
ABCA3-206ENST00000569062 KIAA1217Q5T5P2 1943 aa23.39■■□□□ 1.34
ABCA3-206ENST00000569062 SOX1O00570 391 aaPredicted RBP23.39■■□□□ 1.33
ABCA3-206ENST00000569062 CLTBP09497 229 aa23.39■■□□□ 1.33
ABCA3-206ENST00000569062 CXCL17Q6UXB2 119 aa23.39■■□□□ 1.33
ABCA3-206ENST00000569062 ANKRD33Q7Z3H0 272 aa23.39■■□□□ 1.33
ABCA3-206ENST00000569062 TDHQ8IZJ6 230 aa23.39■■□□□ 1.33
ABCA3-206ENST00000569062 DDAH1O94760 285 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 ITGB8P26012 769 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 FAAP100Q0VG06 881 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 NFXL1Q6ZNB6 911 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 BADQ92934 168 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 RMDN3Q96TC7 470 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 MAP3K14Q99558 947 aa23.38■■□□□ 1.33
ABCA3-206ENST00000569062 A0A0U1RQG5 324 aaPredicted RBP23.37■■□□□ 1.33
ABCA3-206ENST00000569062 CCDC69A6NI79 296 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 B4DLN1 442 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 RXRAP19793 462 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 CDK7P50613 346 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 HSD17B4P51659 736 aa23.37■■□□□ 1.33
ABCA3-206ENST00000569062 MRPL12P52815 198 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms