RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 GBF1Q92538 1859 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 NFIBO00712 420 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 ZNF213O14771 459 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 SDSP20132 328 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 ZNF543Q08ER8 600 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 DUSP28Q4G0W2 176 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 TMEM240Q5SV17 173 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 RNF207Q6ZRF8 634 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 SMC5Q8IY18 1101 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 ESR2Q92731 530 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
CNOT1-215ENST00000569020 ACRP10323 421 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 PTGS1P23219 599 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 CALML3P27482 149 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 CYP2C18P33260 490 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 NT5C2P49902 561 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 POTEHQ6S545 545 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 ZNF365Q70YC5 407 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 C16orf59Q7L2K0 433 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 CHD1LQ86WJ1 897 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 TIFAQ96CG3 184 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 COL25A1Q9BXS0 654 aaPredicted RBP16.04■□□□□ 0.16
CNOT1-215ENST00000569020 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 MTIF3Q9H2K0 278 aaKnown RBP16.04■□□□□ 0.16
CNOT1-215ENST00000569020 ZNF576Q9H609 170 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 IL23AQ9NPF7 189 aa16.04■□□□□ 0.16
CNOT1-215ENST00000569020 WDR19Q8NEZ3 1342 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 B4DLN1 442 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
CNOT1-215ENST00000569020 PSMC6P62333 389 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 GRIN2CQ14957 1233 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 CCDC178Q5BJE1 867 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 GPATCH4Q5T3I0 446 aaKnown RBP16.03■□□□□ 0.16
CNOT1-215ENST00000569020 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 IQCA1Q86XH1 822 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 DGKHQ86XP1 1220 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 CLEC4DQ8WXI8 215 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 ZKSCAN3Q9BRR0 538 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 OSBPL3Q9H4L5 887 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
CNOT1-215ENST00000569020 GRIN2DO15399 1336 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 NEDD4P46934 1319 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 RBM47A0AV96 593 aaKnown RBP16.02■□□□□ 0.16
CNOT1-215ENST00000569020 B4GALT4O60513 344 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 FGBP02675 491 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 CPT1AP50416 773 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 RPS6P62753 249 aaKnown RBP16.02■□□□□ 0.16
CNOT1-215ENST00000569020 PDE4DQ08499 809 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 BRDTQ58F21 947 aaPredicted RBP16.02■□□□□ 0.16
CNOT1-215ENST00000569020 CWC27Q6UX04 472 aaKnown RBP16.02■□□□□ 0.16
CNOT1-215ENST00000569020 PLEKHM2Q8IWE5 1019 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 DNERQ8NFT8 737 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 PBX4Q9BYU1 374 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
CNOT1-215ENST00000569020 DIAPH3Q9NSV4 1193 aa16.02■□□□□ 0.16
CNOT1-215ENST00000569020 LAMA2P24043 3122 aaKnown RBP16.01■□□□□ 0.15
CNOT1-215ENST00000569020 RAD50Q92878 1312 aa16.01■□□□□ 0.15
CNOT1-215ENST00000569020 HIP1O00291 1037 aa16.01■□□□□ 0.15
CNOT1-215ENST00000569020 NKRFO15226 690 aaKnown RBP eCLIP16.01■□□□□ 0.15
CNOT1-215ENST00000569020 GOLGA8HP0CJ92 632 aa16.01■□□□□ 0.15
CNOT1-215ENST00000569020 OR6J1Q8NGC5 347 aa16.01■□□□□ 0.15
CNOT1-215ENST00000569020 HERVK_113Q902F9 699 aa16.01■□□□□ 0.15
CNOT1-215ENST00000569020 TRPV6Q9H1D0 765 aa16.01■□□□□ 0.15
CNOT1-215ENST00000569020 KAT14Q9H8E8 782 aa16.01■□□□□ 0.15
CNOT1-215ENST00000569020 UMODL1Q5DID0 1318 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 KIAA1217Q5T5P2 1943 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 GRXCR1A8MXD5 290 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 KDM4AO75164 1064 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 MYL3P08590 195 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 SUPT20HL2P0C7V6 817 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 CCL23P55773 120 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 PURAQ00577 322 aaKnown RBP16■□□□□ 0.15
CNOT1-215ENST00000569020 NUCB1Q02818 461 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 PPP2R5BQ15173 497 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 RAB30Q15771 203 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 USH1GQ495M9 461 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 RPUSD2Q8IZ73 545 aaKnown RBP16■□□□□ 0.15
CNOT1-215ENST00000569020 PNMA1Q8ND90 353 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 GAS2L1Q99501 681 aaPredicted RBP16■□□□□ 0.15
CNOT1-215ENST00000569020 NOC4LQ9BVI4 516 aaKnown RBP16■□□□□ 0.15
CNOT1-215ENST00000569020 ALDH8A1Q9H2A2 487 aaPredicted RBP16■□□□□ 0.15
CNOT1-215ENST00000569020 MSRAQ9UJ68 235 aa16■□□□□ 0.15
CNOT1-215ENST00000569020 SCN10AQ9Y5Y9 1956 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 IGHDP01880 384 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 PBX2P40425 430 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 IMMTQ16891 758 aaKnown RBP15.99■□□□□ 0.15
CNOT1-215ENST00000569020 OTOP2Q7RTS6 562 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 SCFD2Q8WU76 684 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 MTG1Q9BT17 334 aaPredicted RBP15.99■□□□□ 0.15
CNOT1-215ENST00000569020 DSCC1Q9BVC3 393 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 UBA5Q9GZZ9 404 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 MAF1Q9H063 256 aa15.99■□□□□ 0.15
CNOT1-215ENST00000569020 TNKSO95271 1327 aa15.98■□□□□ 0.15
CNOT1-215ENST00000569020 ABCB11O95342 1321 aa15.98■□□□□ 0.15
CNOT1-215ENST00000569020 B4E1Z4 1266 aa15.98■□□□□ 0.15
CNOT1-215ENST00000569020 TXNP10599 105 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms