RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 COL2A1P02458 1487 aaPredicted RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 YDJCA8MPS7 323 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 M0R2N6 131 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 POLR2DO15514 142 aaKnown RBP12.72□□□□□ -0.37
LYRM1-210ENST00000568820 VIL1P09327 827 aaKnown RBP12.72□□□□□ -0.37
LYRM1-210ENST00000568820 ZNF174Q15697 407 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 SARM1Q6SZW1 724 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
LYRM1-210ENST00000568820 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
LYRM1-210ENST00000568820 NYAP2Q9P242 653 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 ZKSCAN5Q9Y2L8 839 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 ATRNL1Q5VV63 1379 aa12.72□□□□□ -0.37
LYRM1-210ENST00000568820 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
LYRM1-210ENST00000568820 KCNA3P22001 575 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 TXLNAP40222 546 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 MMP14P50281 582 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 ZNF543Q08ER8 600 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 ORC2Q13416 577 aaPredicted RBP12.71□□□□□ -0.37
LYRM1-210ENST00000568820 POSTNQ15063 836 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 DESI1Q6ICB0 168 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 TATDN1Q6P1N9 297 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 TMEM179Q6ZVK1 233 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 HOMER1Q86YM7 354 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 NIM1KQ8IY84 436 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
LYRM1-210ENST00000568820 MKL1Q969V6 931 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 RRAGDQ9NQL2 400 aaPredicted RBP12.71□□□□□ -0.37
LYRM1-210ENST00000568820 DACH1Q9UI36 760 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 PCDHA6Q9UN73 950 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 PCDHA8Q9Y5H6 950 aa12.71□□□□□ -0.37
LYRM1-210ENST00000568820 SMCO2A6NFE2 343 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 SMC2O95347 1197 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 MCM7P33993 719 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 LONP1P36776 959 aaKnown RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 EIF6P56537 245 aaKnown RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 NONOQ15233 471 aaKnown RBP eCLIP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 SPECC1Q5M775 1068 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 TRIML1Q8N9V2 468 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 AGBL3Q8NEM8 1001 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 DCAF4Q8WV16 495 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 PIGSQ96S52 555 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 TDRD3Q9H7E2 651 aaKnown RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 PNMA6FA0A0J9YX94 578 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 VWA3AA6NCI4 1184 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 CFAP99D6REC4 459 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 IKBKBO14920 756 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 CDC25BP30305 580 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 CACNB3P54284 484 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 GRIN1Q05586 938 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 DPCR1Q3MIW9 517 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 PLA2G4DQ86XP0 818 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 ZFPM1Q8IX07 1006 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 DHX40Q8IX18 779 aaKnown RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
LYRM1-210ENST00000568820 SMARCE1Q969G3 411 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 UBA5Q9GZZ9 404 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 MTFR1LQ9H019 292 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 GLT8D2Q9H1C3 349 aa12.7□□□□□ -0.38
LYRM1-210ENST00000568820 FRMPD2Q68DX3 1309 aaPredicted RBP12.69□□□□□ -0.38
LYRM1-210ENST00000568820 PSMD14O00487 310 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 BIN1O00499 593 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 MYO1BO43795 1136 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 SLFN14P0C7P3 912 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 PRPHP41219 470 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 ZNF75DP51815 510 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 PNOCQ13519 176 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
LYRM1-210ENST00000568820 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 PPP2R2DQ66LE6 453 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 DTHD1Q6ZMT9 781 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 DRC7Q8IY82 874 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 REXO1Q8N1G1 1221 aaKnown RBP12.69□□□□□ -0.38
LYRM1-210ENST00000568820 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 MRFAP1L1Q96HT8 127 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 PRMT6Q96LA8 375 aaPredicted RBP12.69□□□□□ -0.38
LYRM1-210ENST00000568820 GMLQ99445 158 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 DNAJC18Q9H819 358 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
LYRM1-210ENST00000568820 SERTAD1Q9UHV2 236 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
LYRM1-210ENST00000568820 MYH8P13535 1937 aa12.68□□□□□ -0.38
LYRM1-210ENST00000568820 AP5Z1O43299 807 aa12.68□□□□□ -0.38
LYRM1-210ENST00000568820 ZNF500O60304 480 aaPredicted RBP12.68□□□□□ -0.38
LYRM1-210ENST00000568820 RAD17O75943 681 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms