RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	KRT32	Q14532	448 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	QRICH1	Q2TAL8	776 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	C1orf53	Q5VUE5	145 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	CREB3L3	Q68CJ9	461 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	HOMER1	Q86YM7	354 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	SAMD3	Q8N6K7	520 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	NSUN6	Q8TEA1	469 aa	Known RBP	12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	LZTS2	Q9BRK4	669 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	LSG1	Q9H089	658 aa	Known RBP	12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	JMJD4	Q9H9V9	463 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	GPHN	Q9NQX3	736 aa	Predicted RBP	12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	MAP3K20	Q9NYL2	800 aa	Known RBP	12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	SEC63	Q9UGP8	760 aa	Known RBP	12.04	□□□□□ -0.48
UBR1-207	ENST00000568782		Q9Y3F1	56 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	PCDHA1	Q9Y5I3	950 aa		12.04	□□□□□ -0.48
UBR1-207	ENST00000568782	PALM3	A6NDB9	673 aa	Predicted RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	NKRF	O15226	690 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	TLR3	O15455	904 aa	Known RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	DYNC1LI2	O43237	492 aa	Predicted RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	ADAMTS4	O75173	837 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	DDAH1	O94760	285 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	CFB	P00751	764 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	ASGR1	P07306	291 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	CST5	P28325	142 aa	Predicted RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	MAGEA10	P43363	369 aa	Predicted RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	GRM4	Q14833	912 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	ARHGEF16	Q5VV41	709 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	SLC30A10	Q6XR72	485 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	TLK2	Q86UE8	772 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	FBXO16	Q8IX29	292 aa	Predicted RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	STAG2	Q8N3U4	1231 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	CLEC4D	Q8WXI8	215 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	LENG1	Q96BZ8	264 aa	Predicted RBP	12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	FGD4	Q96M96	766 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	MAP3K14	Q99558	947 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	SEZ6L	Q9BYH1	1024 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	WDR11	Q9BZH6	1224 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	MAD2L2	Q9UI95	211 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	SLC12A7	Q9Y666	1083 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	DNAH12	Q6ZR08	3092 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782	ELP1	O95163	1332 aa		12.03	□□□□□ -0.48
UBR1-207	ENST00000568782		A0A0U1RQG5	324 aa	Predicted RBP	12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	PQBP1	O60828	265 aa	Known RBP	12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	REC8	O95072	547 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	HMGB1	P09429	215 aa	Known RBP	12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	CLTB	P09497	229 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	CPT1A	P50416	773 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	MDM2	Q00987	491 aa	Predicted RBP	12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	TTLL4	Q14679	1199 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	PPP2R5B	Q15173	497 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	NECTIN1	Q15223	517 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	STXBP2	Q15833	593 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	FSCN1	Q16658	493 aa	Known RBP	12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	TRIM60	Q495X7	471 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	ERICH6B	Q5W0A0	696 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	ZNF654	Q8IZM8	581 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	KLHDC9	Q8NEP7	349 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	IGDCC4	Q8TDY8	1250 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	MORC4	Q8TE76	937 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	SCFD2	Q8WU76	684 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	RRP36	Q96EU6	259 aa	Known RBP	12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	NEK1	Q96PY6	1258 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	IWS1	Q96ST2	819 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	RMDN3	Q96TC7	470 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	GDF15	Q99988	308 aa		12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	UPF3A	Q9H1J1	476 aa	Known RBP	12.02	□□□□□ -0.49
UBR1-207	ENST00000568782	LCT	P09848	1927 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	KIAA1217	Q5T5P2	1943 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	PNMA6F	A0A0J9YX94	578 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	RAG1	P15918	1043 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	SMPD1	P17405	629 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	LIFR	P42702	1097 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	TLE2	Q04725	743 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	TROAP	Q12815	778 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	SNX17	Q15036	470 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	DUSP28	Q4G0W2	176 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	STOX1	Q6ZVD7	989 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	TDH	Q8IZJ6	230 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	CUL5	Q93034	780 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	TOX2	Q96NM4	488 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	PURB	Q96QR8	312 aa	Known RBP	12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	KATNBL1	Q9H079	304 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	TMEM39A	Q9NV64	488 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	POLR3E	Q9NVU0	708 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	MYH7B	A7E2Y1	1941 aa		12.01	□□□□□ -0.49
UBR1-207	ENST00000568782	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12	□□□□□ -0.49
UBR1-207	ENST00000568782	GCOM1	H8Y6P7	765 aa	Predicted RBP	12	□□□□□ -0.49
UBR1-207	ENST00000568782	KPNA6	O60684	536 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	SLC34A2	O95436	690 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	POLR2M	P0CAP2	368 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	TXN	P10599	105 aa	Known RBP	12	□□□□□ -0.49
UBR1-207	ENST00000568782	SMARCA1	P28370	1054 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	BEX3	Q00994	111 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	TAPT1	Q6NXT6	567 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	OR6J1	Q8NGC5	347 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	SYTL5	Q8TDW5	730 aa	Predicted RBP	12	□□□□□ -0.49
UBR1-207	ENST00000568782	PIGS	Q96S52	555 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	RIOX1	Q9H6W3	641 aa		12	□□□□□ -0.49
UBR1-207	ENST00000568782	LY9	Q9HBG7	655 aa		12	□□□□□ -0.49

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